PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944612.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 236aa MW: 27227.3 Da PI: 6.6192

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944612.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	8.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEde+l +v+++G+ W+ + g++R++k+c++rw++yl XP_022944612.1 14 RGAWSFEEDEKLRAYVHRYGPSKWRELPTLAGLTRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	57.2	3.7e-18	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T eE +l+ +++k++G++ W+tIa++++ gRt++++k++w+ + XP_022944612.1 67 RGNYTDEENDLICNLHKKHGNR-WSTIAAKLP-GRTDNEIKNHWNAH 111 899*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MVRAPVVDKD GVRRGAWSFE EDEKLRAYVH RYGPSKWREL PTLAGLTRCG KSCRLRWLNY 60 LRPGIKRGNY TDEENDLICN LHKKHGNRWS TIAAKLPGRT DNEIKNHWNA HLKKQVKPKP 120 QSSTQPKPKQ LTSQVIEAKR EDFTGYSSTT FGILESSSLS QQTSSCDDNF ATQNWGVEDY 180 DRSGYYEDFW TTEQCVSDVL DGCLEFSADY EIGIFSPQHH EPTYDDNYID LFCSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	6e-50	MYB family protein