PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944626.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 136aa    MW: 15284.6 Da    PI: 6.7417
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944626.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.32e-4171061101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+C+kdC++apyfp ++p kfa+vhk+FGasnv+k+l+  + ++r d++ss+vyeA+ar+rdPvyG+vg+i+ lq++++ql+ +la
  XP_022944626.1   7 PCASCKLLRRRCTKDCIFAPYFPPNDPLKFAIVHKIFGASNVSKMLQV-SVDQRADTVSSIVYEANARMRDPVYGCVGIISFLQNEVSQLEMQLA 100
                     7*********************************************87.99******************************************** PP

          DUF260  96 llkeel 101
                     ++++e+
  XP_022944626.1 101 EVHAEI 106
                     *99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MEASSSPCAS CKLLRRRCTK DCIFAPYFPP NDPLKFAIVH KIFGASNVSK MLQVSVDQRA  60
DTVSSIVYEA NARMRDPVYG CVGIISFLQN EVSQLEMQLA EVHAEILSFQ MQQPVAPMTF  120
PTTQMDQSCM FEHSRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.14e-61LBD family protein