PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944785.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 513aa MW: 55218.9 Da PI: 6.5733

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944785.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.5	5.5e-09	328	376	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq XP_022944785.1 328 NSHSLAERVRREKISERMKFLQELVPGC----SKVTGKAVMLDEIINYVQSLQ 376 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MDIGGGDQFR VESSPQDCMS LDMAGCSSST AHVVESFSST IWEQAANSQN LGLLEEHNIC 60 RTSNDIAINK TIGCPIPLSS DNDKTLDISW SLSNNMLKGG GYLNAIPPSL SQLPADSSFI 120 ERAARFSWFS GGNFGDVTGH FDIPEPMDVF SRGMGVVMPE RQEDVPRRNG LGSVSRAGGR 180 FQGNTVNSEA SKPVSLHNAA HGSLLKLDDC CKHAVDGSAN ESELSGGDGS GEPCTLEVAG 240 KEVSAKGIAA KKRKRSGQKA ELDQVNGPLQ QTSVAAQDNT ESQLKGDQNP SSTANKGTVK 300 HGKQASQPLD PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQE LVPGCSKVTG 360 KAVMLDEIIN YVQSLQRQVE FLSMKLATVN PRLDINIDEL LEKDILQSRA GPSSTLGFPS 420 RMPIACPPPH VSHRGLIPVS FPAIASSETL RRSTISSQMT PRSGVYKEPT QIKNMWDGEL 480 HNIVQMSFGM STAPNGLAAE GSDSPGNTKV EQH

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MDIGGGDQFR VESSPQDCMS LDMAGCSSST AHVVESFSST IWEQAANSQN LGLLEEHNIC  60
RTSNDIAINK TIGCPIPLSS DNDKTLDISW SLSNNMLKGG GYLNAIPPSL SQLPADSSFI  120
ERAARFSWFS GGNFGDVTGH FDIPEPMDVF SRGMGVVMPE RQEDVPRRNG LGSVSRAGGR  180
FQGNTVNSEA SKPVSLHNAA HGSLLKLDDC CKHAVDGSAN ESELSGGDGS GEPCTLEVAG  240
KEVSAKGIAA KKRKRSGQKA ELDQVNGPLQ QTSVAAQDNT ESQLKGDQNP SSTANKGTVK  300
HGKQASQPLD PPKEEYIHVR ARRGQATNSH SLAERVRREK ISERMKFLQE LVPGCSKVTG  360
KAVMLDEIIN YVQSLQRQVE FLSMKLATVN PRLDINIDEL LEKDILQSRA GPSSTLGFPS  420
RMPIACPPPH VSHRGLIPVS FPAIASSETL RRSTISSQMT PRSGVYKEPT QIKNMWDGEL  480
HNIVQMSFGM STAPNGLAAE GSDSPGNTKV EQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	256	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	7e-98	bHLH family protein