PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944840.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 365aa MW: 40613.4 Da PI: 8.3044

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944840.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.6	5.6e-41	134	211	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrh+vCe+hskap+v+v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ XP_022944840.1 134 RCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQ 211 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MPISSPTISN LSSSFPSFAA VLAVLEMEIC GNLIGQSNAG RDQAANPTTV WEHLNSSRFH 60 LDWVTANSTH GDAHQHHQCL FAGDHHQGGH FHRDPHLMCL KLGKRHYFED ATAASVVGKR 120 GKPLYSTVPT SVPRCQVEGC HVALVNAKDY HRRHRVCEMH SKAPKVVVVG LEQRFCQQCS 180 RFHVISEFDD SKRSCRRRLA GHNERRRKSS QESVAARNWF GENKSRTGKI AYIPSPTGRA 240 LSLLSSKNES WATSSELSLR SSAALRELIA ENRAAILARQ LNLERDWHSN HTRTADDFGS 300 GGVGLEQSWE KMHDGNGGAQ VTLDLMMQAP RTAFGVLSVS GKSKEEDEEC GELWNSFHYH 360 DSNVV

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MPISSPTISN LSSSFPSFAA VLAVLEMEIC GNLIGQSNAG RDQAANPTTV WEHLNSSRFH  60
LDWVTANSTH GDAHQHHQCL FAGDHHQGGH FHRDPHLMCL KLGKRHYFED ATAASVVGKR  120
GKPLYSTVPT SVPRCQVEGC HVALVNAKDY HRRHRVCEMH SKAPKVVVVG LEQRFCQQCS  180
RFHVISEFDD SKRSCRRRLA GHNERRRKSS QESVAARNWF GENKSRTGKI AYIPSPTGRA  240
LSLLSSKNES WATSSELSLR SSAALRELIA ENRAAILARQ LNLERDWHSN HTRTADDFGS  300
GGVGLEQSWE KMHDGNGGAQ VTLDLMMQAP RTAFGVLSVS GKSKEEDEEC GELWNSFHYH  360
DSNVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	8e-40	SBP family protein