PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944876.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1536aa MW: 168081 Da PI: 7.2568

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944876.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.4	8.8e-10	958	998	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE ++ +av +G++ ++ I+r++g +++ qck ++ XP_022944876.1 958 SWTDEEKSIFMQAVSSYGKD-FDMISRCVG-SKSRDQCKVFFS 998 7***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1536 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG 60 WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKYI RIGRESRGSS TYRDWRSYSR 120 ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS 180 ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPL RVSSLIESSS 240 AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTSMRKDGT LLSSISAELT 300 HSLGSNFSEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG MKCSSPGSGS 360 QNQLQNFFLS LEKLEISSIA KIGSSLVELF QSDDPNTVES CFGKSTLNKL LAYKSDISKT 420 LEMTESEIDL LENELKSLKS KNRGNVSRSK SCSAIYVKES DGVSCISPRP ASLKVVSTSD 480 STVEKMPVCK NVMGVEDVGM KDEEIDSPGT VMSKFNEPTR TEVTDAIVSD KTGRSLSISE 540 LFVDERNECI HAKSCTGESM CGDSMAQAAS GSSLCDLIFA SNKAYASKAA EVIFGSLPAE 600 MFKISSQSTN FVPCSETEKL IKEKFFMRRQ FLKFKESALT LRFKALQHSW KEGLLHSVKK 660 CRSKPQKKEL SLRVTYSGHQ KYRSSIRSRV VQHGACQNRA SNSEIATRFS SKLLSNPRVR 720 RYRNILKMPA MILDKNEKTA LRFVSNNGLV EDPCAVEKER SMINPWSLAE RELFWEKLSL 780 FGKDFRKISS FLSHKTTADC IQFYYKNHKS DSFKKRKNLD LGKQMKSSTM TYMLTSGKKW 840 NPGVNATSLD ILGVASVMAA QEDSNIETQL TCARRFDELQ SEKETVAADV LVGICGSISS 900 EPMSACITSA IHPGEDYREP KCHKVDSATK LPSTSDAMQR TDNEPCSDDS SGDVDSSSWT 960 DEEKSIFMQA VSSYGKDFDM ISRCVGSKSR DQCKVFFSKA RKCLGLDLIR TSEDGGTPRS 1020 GNDASGSGTD SEAHCVVEGA RSSEEIGSKS VDGFCEFGES TAFQQSDAKH AEAVGNLFSE 1080 TSKEVEEDAP NLDSHSACNL ANARASPSQP EPVHDHKIEG SSENTEAGSN RCNEPNVLRS 1140 ESMSTVDENS TAISESGAIT KLAFGEEKGS NSNLHAQSIL QCLVQDSSGI DPQISHPNFL 1200 KVDSVEESCK LEVRDVPKRP MNRDGYAERE NHLSRHVGSS EFPCSHPFNK PIIKDMNRTI 1260 NHTSFPVVRA LSKPDINCNS TYVAEEQECR LQNCNSSKPC HRSAELPFLP PNVEFGHDHR 1320 KNTSCSGSAS DSDVPCRKGD VKLFGQILSH APSQQNSSSG SNECGTKKGL HKSSSTYDMG 1380 ENAPSRSYGF WDGNGLQTGL SAMPDSIVLQ AKYPAAFSGY TATSVKTEQQ PLLTLTKNDD 1440 QAYKTGDGVK KRPYPVDIFS EIHRRNGFDS LSLASLQQQG RMLVGMNVVG RGGILVGNSC 1500 TGISDPVAAI KMHYAKADQY VDGSWRGGNG DIGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1536 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG  60
WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKYI RIGRESRGSS TYRDWRSYSR  120
ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS  180
ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPL RVSSLIESSS  240
AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTSMRKDGT LLSSISAELT  300
HSLGSNFSEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG MKCSSPGSGS  360
QNQLQNFFLS LEKLEISSIA KIGSSLVELF QSDDPNTVES CFGKSTLNKL LAYKSDISKT  420
LEMTESEIDL LENELKSLKS KNRGNVSRSK SCSAIYVKES DGVSCISPRP ASLKVVSTSD  480
STVEKMPVCK NVMGVEDVGM KDEEIDSPGT VMSKFNEPTR TEVTDAIVSD KTGRSLSISE  540
LFVDERNECI HAKSCTGESM CGDSMAQAAS GSSLCDLIFA SNKAYASKAA EVIFGSLPAE  600
MFKISSQSTN FVPCSETEKL IKEKFFMRRQ FLKFKESALT LRFKALQHSW KEGLLHSVKK  660
CRSKPQKKEL SLRVTYSGHQ KYRSSIRSRV VQHGACQNRA SNSEIATRFS SKLLSNPRVR  720
RYRNILKMPA MILDKNEKTA LRFVSNNGLV EDPCAVEKER SMINPWSLAE RELFWEKLSL  780
FGKDFRKISS FLSHKTTADC IQFYYKNHKS DSFKKRKNLD LGKQMKSSTM TYMLTSGKKW  840
NPGVNATSLD ILGVASVMAA QEDSNIETQL TCARRFDELQ SEKETVAADV LVGICGSISS  900
EPMSACITSA IHPGEDYREP KCHKVDSATK LPSTSDAMQR TDNEPCSDDS SGDVDSSSWT  960
DEEKSIFMQA VSSYGKDFDM ISRCVGSKSR DQCKVFFSKA RKCLGLDLIR TSEDGGTPRS  1020
GNDASGSGTD SEAHCVVEGA RSSEEIGSKS VDGFCEFGES TAFQQSDAKH AEAVGNLFSE  1080
TSKEVEEDAP NLDSHSACNL ANARASPSQP EPVHDHKIEG SSENTEAGSN RCNEPNVLRS  1140
ESMSTVDENS TAISESGAIT KLAFGEEKGS NSNLHAQSIL QCLVQDSSGI DPQISHPNFL  1200
KVDSVEESCK LEVRDVPKRP MNRDGYAERE NHLSRHVGSS EFPCSHPFNK PIIKDMNRTI  1260
NHTSFPVVRA LSKPDINCNS TYVAEEQECR LQNCNSSKPC HRSAELPFLP PNVEFGHDHR  1320
KNTSCSGSAS DSDVPCRKGD VKLFGQILSH APSQQNSSSG SNECGTKKGL HKSSSTYDMG  1380
ENAPSRSYGF WDGNGLQTGL SAMPDSIVLQ AKYPAAFSGY TATSVKTEQQ PLLTLTKNDD  1440
QAYKTGDGVK KRPYPVDIFS EIHRRNGFDS LSLASLQQQG RMLVGMNVVG RGGILVGNSC  1500
TGISDPVAAI KMHYAKADQY VDGSWRGGNG DIGSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-106	MYB family protein