PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022944877.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1501aa MW: 164344 Da PI: 7.2469

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022944877.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.6e-10	923	963	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE ++ +av +G++ ++ I+r++g +++ qck ++ XP_022944877.1 923 SWTDEEKSIFMQAVSSYGKD-FDMISRCVG-SKSRDQCKVFFS 963 7***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1501 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG 60 WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKYI RIGRESRGSS TYRDWRSYSR 120 ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS 180 ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPL RVSSLIESSS 240 AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTNCASPAT PSSFACSSSS 300 GLEDKPFSKA ASVDGMKCSS PGSGSQNQLQ NFFLSLEKLE ISSIAKIGSS LVELFQSDDP 360 NTVESCFGKS TLNKLLAYKS DISKTLEMTE SEIDLLENEL KSLKSKNRGN VSRSKSCSAI 420 YVKESDGVSC ISPRPASLKV VSTSDSTVEK MPVCKNVMGV EDVGMKDEEI DSPGTVMSKF 480 NEPTRTEVTD AIVSDKTGRS LSISELFVDE RNECIHAKSC TGESMCGDSM AQAASGSSLC 540 DLIFASNKAY ASKAAEVIFG SLPAEMFKIS SQSTNFVPCS ETEKLIKEKF FMRRQFLKFK 600 ESALTLRFKA LQHSWKEGLL HSVKKCRSKP QKKELSLRVT YSGHQKYRSS IRSRVVQHGA 660 CQNRASNSEI ATRFSSKLLS NPRVRRYRNI LKMPAMILDK NEKTALRFVS NNGLVEDPCA 720 VEKERSMINP WSLAERELFW EKLSLFGKDF RKISSFLSHK TTADCIQFYY KNHKSDSFKK 780 RKNLDLGKQM KSSTMTYMLT SGKKWNPGVN ATSLDILGVA SVMAAQEDSN IETQLTCARR 840 FDELQSEKET VAADVLVGIC GSISSEPMSA CITSAIHPGE DYREPKCHKV DSATKLPSTS 900 DAMQRTDNEP CSDDSSGDVD SSSWTDEEKS IFMQAVSSYG KDFDMISRCV GSKSRDQCKV 960 FFSKARKCLG LDLIRTSEDG GTPRSGNDAS GSGTDSEAHC VVEGARSSEE IGSKSVDGFC 1020 EFGESTAFQQ SDAKHAEAVG NLFSETSKEV EEDAPNLDSH SACNLANARA SPSQPEPVHD 1080 HKIEGSSENT EAGSNRCNEP NVLRSESMST VDENSTAISE SGAITKLAFG EEKGSNSNLH 1140 AQSILQCLVQ DSSGIDPQIS HPNFLKVDSV EESCKLEVRD VPKRPMNRDG YAERENHLSR 1200 HVGSSEFPCS HPFNKPIIKD MNRTINHTSF PVVRALSKPD INCNSTYVAE EQECRLQNCN 1260 SSKPCHRSAE LPFLPPNVEF GHDHRKNTSC SGSASDSDVP CRKGDVKLFG QILSHAPSQQ 1320 NSSSGSNECG TKKGLHKSSS TYDMGENAPS RSYGFWDGNG LQTGLSAMPD SIVLQAKYPA 1380 AFSGYTATSV KTEQQPLLTL TKNDDQAYKT GDGVKKRPYP VDIFSEIHRR NGFDSLSLAS 1440 LQQQGRMLVG MNVVGRGGIL VGNSCTGISD PVAAIKMHYA KADQYVDGSW RGGNGDIGSS 1500 R

Sequence ? help Back to Top

Protein Sequence Length: 1501 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG  60
WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKYI RIGRESRGSS TYRDWRSYSR  120
ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS  180
ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPL RVSSLIESSS  240
AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTNCASPAT PSSFACSSSS  300
GLEDKPFSKA ASVDGMKCSS PGSGSQNQLQ NFFLSLEKLE ISSIAKIGSS LVELFQSDDP  360
NTVESCFGKS TLNKLLAYKS DISKTLEMTE SEIDLLENEL KSLKSKNRGN VSRSKSCSAI  420
YVKESDGVSC ISPRPASLKV VSTSDSTVEK MPVCKNVMGV EDVGMKDEEI DSPGTVMSKF  480
NEPTRTEVTD AIVSDKTGRS LSISELFVDE RNECIHAKSC TGESMCGDSM AQAASGSSLC  540
DLIFASNKAY ASKAAEVIFG SLPAEMFKIS SQSTNFVPCS ETEKLIKEKF FMRRQFLKFK  600
ESALTLRFKA LQHSWKEGLL HSVKKCRSKP QKKELSLRVT YSGHQKYRSS IRSRVVQHGA  660
CQNRASNSEI ATRFSSKLLS NPRVRRYRNI LKMPAMILDK NEKTALRFVS NNGLVEDPCA  720
VEKERSMINP WSLAERELFW EKLSLFGKDF RKISSFLSHK TTADCIQFYY KNHKSDSFKK  780
RKNLDLGKQM KSSTMTYMLT SGKKWNPGVN ATSLDILGVA SVMAAQEDSN IETQLTCARR  840
FDELQSEKET VAADVLVGIC GSISSEPMSA CITSAIHPGE DYREPKCHKV DSATKLPSTS  900
DAMQRTDNEP CSDDSSGDVD SSSWTDEEKS IFMQAVSSYG KDFDMISRCV GSKSRDQCKV  960
FFSKARKCLG LDLIRTSEDG GTPRSGNDAS GSGTDSEAHC VVEGARSSEE IGSKSVDGFC  1020
EFGESTAFQQ SDAKHAEAVG NLFSETSKEV EEDAPNLDSH SACNLANARA SPSQPEPVHD  1080
HKIEGSSENT EAGSNRCNEP NVLRSESMST VDENSTAISE SGAITKLAFG EEKGSNSNLH  1140
AQSILQCLVQ DSSGIDPQIS HPNFLKVDSV EESCKLEVRD VPKRPMNRDG YAERENHLSR  1200
HVGSSEFPCS HPFNKPIIKD MNRTINHTSF PVVRALSKPD INCNSTYVAE EQECRLQNCN  1260
SSKPCHRSAE LPFLPPNVEF GHDHRKNTSC SGSASDSDVP CRKGDVKLFG QILSHAPSQQ  1320
NSSSGSNECG TKKGLHKSSS TYDMGENAPS RSYGFWDGNG LQTGLSAMPD SIVLQAKYPA  1380
AFSGYTATSV KTEQQPLLTL TKNDDQAYKT GDGVKKRPYP VDIFSEIHRR NGFDSLSLAS  1440
LQQQGRMLVG MNVVGRGGIL VGNSCTGISD PVAAIKMHYA KADQYVDGSW RGGNGDIGSS  1500
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-95	MYB family protein