PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944893.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 264aa    MW: 29783.9 Da    PI: 9.5829
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944893.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.99.6e-133074147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a++++  + Wk+I + +g  +t  q++s+ qky
   XP_022944893.1 30 RESWTEPEHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MALPFNAAPT SSREDLSKRA RKPYTITKCR ESWTEPEHDK FLEAIQLFDR DWKKIEAFVG  60
SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAAHPY PQKASKIDLA LVSRPLQPSS  120
VEPECITKPD SSSVPVSFVS AAAMPSRADH SIHTANFSQA ARGEVKQNNC SITRTRFPTK  180
SSSIEENNNL PLRVLPDFGQ VYNFIGSVFD PKAIDHLQRL NKMDQIDVET VLLLMRNLAI  240
NLSSPDFEDH KRVLSSYDAF MEHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.25e-86MYB_related family protein