PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022944974.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 211aa    MW: 24461.4 Da    PI: 4.4977
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022944974.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.61e-184396356
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    k++++t++ql+ Le+ F  ++++ ++++ ++A+++gL  rqV vWFqNrRa+ k
  XP_022944974.1 43 KKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSK 96
                    45689***********************************************99 PP
2HD-ZIP_I/II111.17.2e-3642134193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrl+ +q++lLE+sF+ ++kLe++rK ++a+e+gl+prqvavWFqnrRAR ktk++  dy++L ++y++lk+e ++L k ++eL++e++e
  XP_022944974.1  42 EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDE 134
                     69**************************************************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MFFISSTKKP SPFDNPGCTH FPVMNSDTPP SLSSPNSFSS MEKKRRLTPD QLRLLETSFD  60
VHNKLEHDRK LQIAEEIGLR PRQVAVWFQN RRARSKTKKI VFDYDSLNSQ YQNLKNEFDS  120
LVKLNQELKT EVDELREKWA AIEKMKNPFE PDELEAMDSS VTELLGESFL QDEEDELGYL  180
GKLEDELSAN EFMDSFDICA SGLIDFKYDS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27045.14e-32HD-ZIP family protein