PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945007.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Nin-like
Protein Properties Length: 254aa    MW: 29955.2 Da    PI: 6.3805
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945007.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK76.53e-24143192352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     k + l++++k+F+ pi++AAk ++v+lTvLKr+CR++ I+RWPhRk+ksl
  XP_022945007.1 143 KVLGLDEIQKHFDIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSL 192
                     67899*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MEPSAKLHPH DFDFEWPYHQ HLFPFDHEAL ELPPLDVDAS FDFNSLSLPF HWDDISELEA  60
EILWLDKHMI PVTPLNDEDM LAVDETKAER MVKLKDNDGT SRELQEETRV IETGLSSCKE  120
NEEEEECERR MRLIMRNGRR KSKVLGLDEI QKHFDIPITE AAKAMNVGLT VLKRRCRELH  180
IMRWPHRKLK SLNSLITNVQ EMGLTNEIKG LEEHKRLVEE LPDTDLTHRT RRLRQACFKA  240
NYKKKRRSNV AALR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243247KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.18e-36Nin-like family protein