PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945053.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 344aa MW: 36484.8 Da PI: 7.6462

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945053.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.8	1.2e-35	76	178	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec......eaesssssasnsssg.. 88 ++k++++++hTkv+gR+RR+R++a caar+F+L++eL +++d++ti WLl+ a+pai+e+tgt++ +a ++ + ++ XP_022945053.1 76 KPAKRPSKDRHTKVEGRGRRIRMPAACAARIFQLTRELDHKSDGETIRWLLEHAEPAIIEATGTGTVPAIAVsvggtlK------------IPtt 158 5789************************************************************888884443222111............1111 PP TCP 89 ......kaaksaakskksqk 102 ++ ++a+ ++++++ XP_022945053.1 159 slarpnAKIPEAPRKRRQKH 178 11122222222221111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MEEANQNHRV EEEEQEGISN GCSETQTQTT ADSLNLIKAE ESLSGQPSDH QTAVSGHGLD 60 TSHPFSLFQI PSTRAKPAKR PSKDRHTKVE GRGRRIRMPA ACAARIFQLT RELDHKSDGE 120 TIRWLLEHAE PAIIEATGTG TVPAIAVSVG GTLKIPTTSL ARPNAKIPEA PRKRRQKHAY 180 AESNNGNDQT SVSSGLTPIT PMAAYGAGIV PFWANAGGVT EQFFMVPGTS SNQQPQLWAV 240 PARPISNFVS SINPSLQFGG VVPILARGGI TNCSSGMGSG SSSATISQSS IPVTMSAPST 300 SSAASSIGTT EMLRDFSMEI HEKKELELMG RAKAANSEAP CSKP

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MEEANQNHRV EEEEQEGISN GCSETQTQTT ADSLNLIKAE ESLSGQPSDH QTAVSGHGLD  60
TSHPFSLFQI PSTRAKPAKR PSKDRHTKVE GRGRRIRMPA ACAARIFQLT RELDHKSDGE  120
TIRWLLEHAE PAIIEATGTG TVPAIAVSVG GTLKIPTTSL ARPNAKIPEA PRKRRQKHAY  180
AESNNGNDQT SVSSGLTPIT PMAAYGAGIV PFWANAGGVT EQFFMVPGTS SNQQPQLWAV  240
PARPISNFVS SINPSLQFGG VVPILARGGI TNCSSGMGSG SSSATISQSS IPVTMSAPST  300
SSAASSIGTT EMLRDFSMEI HEKKELELMG RAKAANSEAP CSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-59	TCP family protein