PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945058.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 238aa    MW: 25278.1 Da    PI: 6.5112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945058.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.2e-1668117155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr  +++g+Wv+eIr p++   ++r++lg++ t+++Aa+a++ a+++l+g
  XP_022945058.1  68 PKFRGVR--SRSGKWVSEIRQPRQ---TTRIWLGTYPTPDMAAAAYDVAALALKG 117
                     79****6..668*********943...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MRVASHSKLW ECCPRIPHGF YSSSPFSFIN SSLFLPHFIA SASESDSFMS DDTQSSSSSS  60
SSSSNRHPKF RGVRSRSGKW VSEIRQPRQT TRIWLGTYPT PDMAAAAYDV AALALKGPDA  120
SLNFPDALLS YRIPSSTSPS DIRAAAALAA AARHPDTAPA PAPAAHTRPV GGAGFSSDAT  180
AAAAAAREFV DEEELLNMPN LLVDMAEGML VSPPRIKSLS SDDSPTNSPG DGLWSYSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-44ERF family protein