PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945215.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 461aa MW: 51569.4 Da PI: 6.5392

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945215.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88.6	5.8e-28	214	267	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_022945215.1 214 LKVDWTPELHRKFVQAVEQL-GVNQAIPSRILELMKVEGLTRHNVASHLQKYRMH 267 5899**************.9*****************************96 PP
2	Myb_DNA-binding	44	5.2e-14	216	265	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022945215.1 216 VDWTPELHRKFVQAVEQLGVNqaIPSRILELMKvEGLTRHNVASHLQKYR 265 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MISNIHCLST MMKCIELGAI EFLQKPVSED KLRNIWQHVV HKAFNAGGNA VPSSLKPIKE 60 SVASILHLEL ENNENKNQVP HELEISSCDN VDDHELLLLP EGSDKYPAPS TPQQKHGMRL 120 VDQMNDLLEK ECGEQDGEES KSVETTCTAQ VENSQLSDKE VIKEEENSTD GCGAASNVDH 180 ELHDRDNISS SEKNKSKACG LGNPCRTKVS GKKLKVDWTP ELHRKFVQAV EQLGVNQAIP 240 SRILELMKVE GLTRHNVASH LQKYRMHKRH ILPKEEDGSW SSSKDPMRKN YYPHPQRPVM 300 AYPPPYHSNH VMPVAPIGSW GHMACPSPGV QMWAPPPSYP PWRPPETWPW KSYLGVHGEA 360 WGCPVTPPPP HSPFSSNPHQ HIAIFEYVDV HDKSYGIAPS PVDLQLADEE IDKVVKEAIS 420 KPWLPLPLGL KPPSTESVLS ELSRQQISTT PFHINGSKLL H

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MISNIHCLST MMKCIELGAI EFLQKPVSED KLRNIWQHVV HKAFNAGGNA VPSSLKPIKE  60
SVASILHLEL ENNENKNQVP HELEISSCDN VDDHELLLLP EGSDKYPAPS TPQQKHGMRL  120
VDQMNDLLEK ECGEQDGEES KSVETTCTAQ VENSQLSDKE VIKEEENSTD GCGAASNVDH  180
ELHDRDNISS SEKNKSKACG LGNPCRTKVS GKKLKVDWTP ELHRKFVQAV EQLGVNQAIP  240
SRILELMKVE GLTRHNVASH LQKYRMHKRH ILPKEEDGSW SSSKDPMRKN YYPHPQRPVM  300
AYPPPYHSNH VMPVAPIGSW GHMACPSPGV QMWAPPPSYP PWRPPETWPW KSYLGVHGEA  360
WGCPVTPPPP HSPFSSNPHQ HIAIFEYVDV HDKSYGIAPS PVDLQLADEE IDKVVKEAIS  420
KPWLPLPLGL KPPSTESVLS ELSRQQISTT PFHINGSKLL H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	5e-82	ARR-B family protein