PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945371.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 338aa MW: 37664.5 Da PI: 10.1367

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945371.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.5	3.6e-18	50	138	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ v +L+ea+++++ +r+klk+++We+v++++ ++ f++spk qCk+k+e+++kry+ + +++ + + +ss++p++++l+ XP_022945371.1 50 EWSEGAVATLLEAYESKWVLRNRAKLKGHDWEDVARHVsSRANFTKSPKtqtQCKNKIESMKKRYRSESASAVDA-AAASSSWPLYHRLD 138 5***********************************756667776643339****************97.677779****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MDINPTPSPP ISDTNHHHHH PPLPSAATHG DPSPKKALSS TVGDRLKRDE WSEGAVATLL 60 EAYESKWVLR NRAKLKGHDW EDVARHVSSR ANFTKSPKTQ TQCKNKIESM KKRYRSESAS 120 AVDAAAASSS WPLYHRLDLL LRGNTQPPPL ATSVILVDAP PPPPPPPPPF EATLNCLGSN 180 GVDGIIPKED RVDETRVSDK EEKNKNNNNN VVLETDSSTP AMPYSDNEKL RSKQQPKAKK 240 TKMKKKKKKK TRMSDELDEI ASSIRWLAEV VTRSEQTRME TMRDIERMRA EAEAKRGEMD 300 LKRTEIIANT QLEIAKLFAA GSKAADSSSR IGRPTSFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	250	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	2e-96	Trihelix family protein