PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945399.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 367aa MW: 40594.3 Da PI: 6.4154

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945399.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.7	2.3e-14	167	213	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L XP_022945399.1 167 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 213 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MRGEDQEQDH HHQHQGECSQ TIENMFQEQL LLHQQLQNNT TDHIIYGDHH HHGAGRGLIF 60 PADVVSPVLN SWPPLNPFLI PPPPPPPPPT SLCSSSSYGN LFNRRPANCL QFAYDGTSSA 120 DHLGRIISTT LGPVVHHGST APFGLQAELG KMSAQEIMDA KALAASKSHS EAERRRRERI 180 NNHLAKLRSL LPSTTKTDKA SLLAEVIQHV KELKRQTSLI AETSPIPTDI DELTVDDASD 240 EMMINGAKFV IKASLCCEDR SDLLPDLIKT LKSLRLRTLK AEITTLGGRV RNVLFVTGED 300 DEPSTDHNNN DNNNNNNNPN SDSQQQQQQH SISSIQEALK AVMEKTGPDD SSSGNIKRQR 360 TNNINIL

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MRGEDQEQDH HHQHQGECSQ TIENMFQEQL LLHQQLQNNT TDHIIYGDHH HHGAGRGLIF  60
PADVVSPVLN SWPPLNPFLI PPPPPPPPPT SLCSSSSYGN LFNRRPANCL QFAYDGTSSA  120
DHLGRIISTT LGPVVHHGST APFGLQAELG KMSAQEIMDA KALAASKSHS EAERRRRERI  180
NNHLAKLRSL LPSTTKTDKA SLLAEVIQHV KELKRQTSLI AETSPIPTDI DELTVDDASD  240
EMMINGAKFV IKASLCCEDR SDLLPDLIKT LKSLRLRTLK AEITTLGGRV RNVLFVTGED  300
DEPSTDHNNN DNNNNNNNPN SDSQQQQQQH SISSIQEALK AVMEKTGPDD SSSGNIKRQR  360
TNNINIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-77	bHLH family protein