PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945400.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 308aa    MW: 35631.3 Da    PI: 8.756
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945400.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.53.3e-40892093130
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 
                       kdrhski+T++g+RdRR+Rls+e+a+ fFdLqd+LGfdk+skt+eWL+ ++  aikel +   s         ++ ++s++ s+  +k +  +
  XP_022945400.1  89 SNKDRHSKICTSKGPRDRRMRLSIEIARSFFDLQDMLGFDKASKTVEWLFAKSRSAIKELKEKYLSEG-------NNYNKSFDFSPLFRKVSVFE 176
                     579************************************************************44444.......22334444444333333344 PP

             TCP  98 kksqksaasalnlakesrakarararertrekm 130
                      +++k+  + + ++kesr+karararertr k 
  XP_022945400.1 177 APREKKRRKLRVVDKESRSKARARARERTRAKI 209
                     455555555689******************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MLASNTNQIH DEHESHQLSL QFIDYYNFDP FLDEDFILSQ ILYTQKQQFL DANNFEPEIG  60
FEISVNNTNE EITQKALPQK KPISRKRSSN KDRHSKICTS KGPRDRRMRL SIEIARSFFD  120
LQDMLGFDKA SKTVEWLFAK SRSAIKELKE KYLSEGNNYN KSFDFSPLFR KVSVFEAPRE  180
KKRRKLRVVD KESRSKARAR ARERTRAKIV RRLEISKCDF EGNPIGDCMM GDVSEEIGTK  240
NKNFEFERGE NERFLSSNVK NSADHVHLLP GSSMDMSSMS LDSTKASPAG LKVLELDEID  300
GVLIFYGE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181185KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.13e-31TCP family protein