PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945562.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 309aa    MW: 34831.8 Da    PI: 6.9094
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945562.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00039173195123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_022945562.1 173 HECAICGAEFTSGQALGGHMRRH 195
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEVDHEDGVM GSKEQALIAK ENNDFVAENN DYVAVPVHNV SFSPSSSSAE LQPSITTDEE  60
EDMANCLILL AQGRPQTPKH VDNNRSTVGA EKGVGIGCYG YECKTCYRTF PSFQALGGHR  120
ASHKKSKAIE AEKKVLLCSD DEEIQFKNNM THSISLQLNQ KGSLCSNGKG KVHECAICGA  180
EFTSGQALGG HMRRHRAMPV AMNTALSLTP MAMEGEDQRQ PKRQRNMVSL DLDLNLPAPQ  240
EHDHHRESKF MIKSNQYQQQ QTQHQTQQQT QHQTQQQQQQ YKQQQQQKQQ QQQQQPLVFP  300
SRTLVDCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.11e-46C2H2 family protein