PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945568.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 221aa    MW: 24406.2 Da    PI: 8.0527
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945568.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26091.69.5e-294106198
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C++lr++C++dC+++p++     p++q++++ +++k++G++ + +l++a+ e+ r+++++sl+yeA+ r+ +PvyG+vg++ ++ ++ +q+
  XP_022945568.1   4 SCNGCRILRKGCSHDCIIRPCLqwipsPDSQANATIFLAKFYGRAGLFNLITAAAEHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQA 98 
                     6************************9999****************************************************************** PP

          DUF260  91 kaelallk 98 
                     +++++l++
  XP_022945568.1  99 AVDAVLTG 106
                     *9998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MRMSCNGCRI LRKGCSHDCI IRPCLQWIPS PDSQANATIF LAKFYGRAGL FNLITAAAEH  60
LRPAIFKSLL YEACGRMVNP VYGSVGLLCS GDWDKCQAAV DAVLTGSMIV EPDAPLSNTN  120
LSLKCCDIRH VCNDTNLAVP GELHKGKTRN RFKKPDHRAK SKPKPGPGHE LGSGSNVEVI  180
EIDRMADDLM TNRRKPGWVL RNGMWVEEED VELELTLNSA Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68510.13e-63LBD family protein