PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945573.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 451aa MW: 50120.4 Da PI: 6.519

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945573.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.8	7.3e-52	33	160	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL +++k++++e+yfFs dkky +g r nrat++gyWkatg+d++v XP_022945573.1 33 LAPGFRFHPTDEELVIYYLKRKVCGKSFRF-NAISEVDIYKSEPWDLAgkSRLKSRDQEYYFFSVLDKKYGNGARMNRATSQGYWKATGNDRQVR 126 579***********************99.89**********85348889999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vglkktLvf++grap+g++t+Wvmheyrl XP_022945573.1 127 H-DTRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 160 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MGSETLTLLP PLALTKPVAA AAAAAAAAAP TALAPGFRFH PTDEELVIYY LKRKVCGKSF 60 RFNAISEVDI YKSEPWDLAG KSRLKSRDQE YYFFSVLDKK YGNGARMNRA TSQGYWKATG 120 NDRQVRHDTR TVGLKKTLVF HSGRAPDGKR TNWVMHEYRL VDEELEKAGA GTGSSKDAYV 180 LCRVFHKSNI GPPNGHRYAP FIEEEWDDGG SVLIPGEEIA DGVVASHDTQ SEKNSNSVCA 240 AEDRNNHVCG DGKDGMQERT QFINKDLVMS NDPPRNSHSF LFMCKSEELE DYTPPSIIAN 300 PKPFSLMKYK RRRQSDLPSE LSKASENSSM SNEELSLSEI ATASQTDVTM SSVTTPTTKN 360 FLSTLVEYSL LESTEPKDSP APPPSLETSD LSSSVHPSIL KFIQDLQHEI HKTSMERETL 420 KFELLSARAM ISILQSRIVV LNKEINDLKS N

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MGSETLTLLP PLALTKPVAA AAAAAAAAAP TALAPGFRFH PTDEELVIYY LKRKVCGKSF  60
RFNAISEVDI YKSEPWDLAG KSRLKSRDQE YYFFSVLDKK YGNGARMNRA TSQGYWKATG  120
NDRQVRHDTR TVGLKKTLVF HSGRAPDGKR TNWVMHEYRL VDEELEKAGA GTGSSKDAYV  180
LCRVFHKSNI GPPNGHRYAP FIEEEWDDGG SVLIPGEEIA DGVVASHDTQ SEKNSNSVCA  240
AEDRNNHVCG DGKDGMQERT QFINKDLVMS NDPPRNSHSF LFMCKSEELE DYTPPSIIAN  300
PKPFSLMKYK RRRQSDLPSE LSKASENSSM SNEELSLSEI ATASQTDVTM SSVTTPTTKN  360
FLSTLVEYSL LESTEPKDSP APPPSLETSD LSSSVHPSIL KFIQDLQHEI HKTSMERETL  420
KFELLSARAM ISILQSRIVV LNKEINDLKS N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-119	NAC family protein