PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945589.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 330aa    MW: 37343.5 Da    PI: 4.4905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945589.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19105155155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_022945589.1 105 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 155
                     59********.**********82....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDDTLFSPVK FTEHRSFTNK FSSRKQPPSQ NRVVRIAVTD PDATDSSSDE EGEFFERQRV  60
KRYVNEIKIQ TAPRNTLLPS ARKRPAAEGS DSRRPVKAAP VMNGKKFRGV RQRPWGKWAA  120
EIRDPARRVR LWLGTYDTAE EAAMVYDNAA IQLRGPDALT NFAIPPPPLP ETEVEAANIP  180
SVSGSYDDSC EESHNLSSPS SVLRFRTPSL EESEKPQNSS VFQKPPPPPL PPMADHQLRE  240
CQGETSFYEE YYTDFPKFED VFQLPFSESP MFLDDQPLYL EESIYNDGFS DWFTNLPDDF  300
GSPLLSSSIS QVGEDYFQDI LMGSDPLVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-55ERF family protein