PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945608.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SRS

Protein Properties

Length: 286aa MW: 30427 Da PI: 9.3116

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945608.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	184.9	3.1e-57	97	264	4	153
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa......aeaaskrkrel..kskkqsalsstk 90 a C+dCGn+akk+C+++RCRtCCk rg +C+thvkstWvpa++rrerq + +a+ ++a +kr+r l ++++ +a+s+++ XP_022945608.1 97 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATASGDggssgsSSAGAKRPRVLipSQSTPAAASHAS 191 5679*******************************************9877665544444445666767788889998855444455666666 PP DUF702 91 lssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 s a++++++et+s lP +v+++avfr rv++++ ge elaYq++v+igGhvfkG+LydqG+ XP_022945608.1 192 ASIATTSRSFETTSnhqdasfkksLPGQVRAPAVFRYHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGVV 264 677777777777777889999999*********************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MLGLRDVLFL APTSTSDHHS SLPLHSPAAL GVSVGIFPLL AATPSLPPPP QPPPNQTAEE 60 VSDRTRSLEN LKKTHDFGFG KGDSFIAGDK GDAGESSMAV CRDCGNRAKK ECEYRRCRTC 120 CKGRGNHCST HVKSTWVPAS RRRERQMLVV MDGVATASGD GGSSGSSSAG AKRPRVLIPS 180 QSTPAAASHA SASIATTSRS FETTSNHQDA SFKKSLPGQV RAPAVFRYHR VTAISSGEGE 240 LAYQATVNIG GHVFKGFLYD QGVVDHKNGY PSLSHLHLES GSHHRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	2e-46	SRS family protein