PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945652.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 929aa MW: 104209 Da PI: 6.5737

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945652.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.6	7.3e-09	195	248	23	76
trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 +gk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e+ XP_022945652.1 195 SGKTRADKDREVAEYLQKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQL 248 4578889999*************************************9976655 PP

Sequence ? help Back to Top
Protein Sequence Length: 929 aa Download sequence
MPENTETSHQ HDYDSPSPKH PLDDSLETRP PNGGGGGHLH RRHFHHHDSS TPFISTPLYL 60 PTGTGNTPPF EAVNPKRTRY SAGQWKLVPS PSSSQPQIAV VGSDSSPSPS QRPAGTAAAS 120 SSDTTSSPSH SPLPLTTGNK GEGESQNQPQ YRKGKYVSPV WKPNEMLWLA RAWRVQYQGG 180 SDEGGIMGGQ GGRGSGKTRA DKDREVAEYL QKHGVNRDAK TAGTKWDNML GEFRKVYEWE 240 RGGEREQLMG KSYFRLSPYE RKLHRLPASF DEQVFEELSQ FMGSKMRTKP TPILPLTRSL 300 PPPPPFTEEH LPILSREKQV FRVDYSSVDC SSVRRIGKVR MVWEESVSLW GEEGSEEQRG 360 GRIRVEGCSF LNAEELTFFD ESMVACTMEC NDDGPLKGLS VDRFVPGQQI KVFGRRKSPF 420 STSTGSSILH GRGLWLTLGD LIGFCSASSL WNYQDSTEYY VGCLRIPPLS LPSLSELSWH 480 IQEPPSEELR FPIRKDVYAY LPQGKEVFFT TTTEMVDCKS FIYEILCPII RTNPCISTTT 540 PPSSRDSFIG LWDDCINRLV SEFCCMEMQI IRKPNSPSST NIDSLQDQWP NLTGFIRNFC 600 LWRGEETDQI KDGHQDLDPS NSIVEKLLWT YLDIPYLLGY YTIGFLVTFC SLSRGRDNRV 660 VRTDLYSLDL STPSERLKAL VPCYRIGGVL SLLADQCNKL PIYSDFERID MGNGIVVEMT 720 PNLVTKIFSC RRKWTAAKEI YDVLDQRIPH SEFIFGASEE DLALVFKPRV CRLKPTSYDQ 780 LIEALKNVTK ALVALHDLCF MHRDICWEKV MKKTNADETA TGEWILCGFE EAVGAPQIYP 840 YGEATAASGR HAPEMERGLH GVKVDMWGVG FLIKTCGLIG IPKMLNELQN RCMDQNPEHR 900 PTAADCYHHL LQLQSSLSTS TGAAGGGLI

Sequence ? help Back to Top

Protein Sequence Length: 929 aa Download sequence

MPENTETSHQ HDYDSPSPKH PLDDSLETRP PNGGGGGHLH RRHFHHHDSS TPFISTPLYL  60
PTGTGNTPPF EAVNPKRTRY SAGQWKLVPS PSSSQPQIAV VGSDSSPSPS QRPAGTAAAS  120
SSDTTSSPSH SPLPLTTGNK GEGESQNQPQ YRKGKYVSPV WKPNEMLWLA RAWRVQYQGG  180
SDEGGIMGGQ GGRGSGKTRA DKDREVAEYL QKHGVNRDAK TAGTKWDNML GEFRKVYEWE  240
RGGEREQLMG KSYFRLSPYE RKLHRLPASF DEQVFEELSQ FMGSKMRTKP TPILPLTRSL  300
PPPPPFTEEH LPILSREKQV FRVDYSSVDC SSVRRIGKVR MVWEESVSLW GEEGSEEQRG  360
GRIRVEGCSF LNAEELTFFD ESMVACTMEC NDDGPLKGLS VDRFVPGQQI KVFGRRKSPF  420
STSTGSSILH GRGLWLTLGD LIGFCSASSL WNYQDSTEYY VGCLRIPPLS LPSLSELSWH  480
IQEPPSEELR FPIRKDVYAY LPQGKEVFFT TTTEMVDCKS FIYEILCPII RTNPCISTTT  540
PPSSRDSFIG LWDDCINRLV SEFCCMEMQI IRKPNSPSST NIDSLQDQWP NLTGFIRNFC  600
LWRGEETDQI KDGHQDLDPS NSIVEKLLWT YLDIPYLLGY YTIGFLVTFC SLSRGRDNRV  660
VRTDLYSLDL STPSERLKAL VPCYRIGGVL SLLADQCNKL PIYSDFERID MGNGIVVEMT  720
PNLVTKIFSC RRKWTAAKEI YDVLDQRIPH SEFIFGASEE DLALVFKPRV CRLKPTSYDQ  780
LIEALKNVTK ALVALHDLCF MHRDICWEKV MKKTNADETA TGEWILCGFE EAVGAPQIYP  840
YGEATAASGR HAPEMERGLH GVKVDMWGVG FLIKTCGLIG IPKMLNELQN RCMDQNPEHR  900
PTAADCYHHL LQLQSSLSTS TGAAGGGLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	9e-07	Trihelix family protein