PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945725.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 353aa    MW: 38264 Da    PI: 7.0338
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945725.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17258291134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022945725.1 258 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 291
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MVGNSFVDDL DCGSFFDHID DLLDFPVEDV DAGLPPAKGG DSGNSFPTIW STQSEALPGS  60
DSVFSASRNS DLSADLSVPY EDIVQLEWLS NFVEDSFCGG GSLATMSKEE PKGLTHTQFQ  120
TSSPVSVLES SSSCSSDKSL PRSPEPTIAT PAHQRGRARS KRPRPATFCP RPPIQLISPA  180
SSVSETTHDP HHQVLQVIAP KTTSDSDNFA ESRPLNKMPK HGALGMQKKN KKIKLSFSLA  240
PLDGAASQNS PSQSMRKCMH CEITKTPQWR AGPMGPKTLC NACGVRYKSG RLFPEYRPAA  300
SPTFVPSLHS NSHKKVLEMR NKTDEKTAAN VITITVQPEL IPNTNSAISM DYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-45GATA family protein