PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945771.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 530aa MW: 59137.4 Da PI: 8.3931

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945771.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	80	2.7e-25	196	249	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp++ Wt+ LH+rF++a++ + G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ XP_022945771.1 196 KPKVIWTNSLHNRFLQAIKLI-GLDKAVPKKILEFMNVPGLTRENVASHLQKYRI 249 799**************99.******************************6 PP
2	Myb_DNA-binding	32.6	1.9e-10	201	248	4	48
S-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a+k+ G + +k+I + m+ g+t++++ s++qky+ XP_022945771.1 201 WTNSLHNRFLQAIKLIGLDkaVPKKILEFMNvPGLTRENVASHLQKYR 248 ***********************************************7 PP
3	Response_reg	63	1.5e-21	15	121	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + + ++ +l+ +y +v + +++ eal++l++++ ++l+++D+ mp+++Gl+l k+ +e klp+i+++a ++++ +l+ l+ G XP_022945771.1 15 VLLVDDDATSLAVVSAMLRVCKY-QVVTLKNPMEALDTLRARKgfFHLLVTDLHMPQLSGLQLQKQVMQEF-KLPVIMMSADEKPSVILKSLEEG 107 89*******************.9999*******999999******************9988.9****************** PP ESEEEESS--HHHH CS Response_reg 94 akdflsKpfdpeel 107 + + +Kp++ +++ XP_022945771.1 108 VAFYMVKPISLNDV 121 *******99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MGEVCEGVKF VDIHVLLVDD DATSLAVVSA MLRVCKYQVV TLKNPMEALD TLRARKGFFH 60 LLVTDLHMPQ LSGLQLQKQV MQEFKLPVIM MSADEKPSVI LKSLEEGVAF YMVKPISLND 120 VKHVWQYAIT PKKVSPDQTR TIIPHELSIQ IQKSSFKNSS SSPSCSRREI KSKSAEPKNK 180 KAKESKVAKN SIAIRKPKVI WTNSLHNRFL QAIKLIGLDK AVPKKILEFM NVPGLTRENV 240 ASHLQKYRIF LKRVAEKGAR SMKIYCDNVL QRSNSAAPHV QYPLYRSKLQ AQHPNFPQNQ 300 RLMAPINNQC PSLGSFKQPT PQNPNLEGAS MENPLAHFWN QKYSTLLTIN KLNFPNFNGD 360 QNFVLVRNEN PKCSSDGTGR TTGEDRMICS SRNGVCNVQA SDDLNNGGCA SIGSYFGQFE 420 GRNQLLPVVS NINVEKNVLV SSEEEVGNDN IWKAANESNA FGDIGEDQSY FDVLSDIFMG 480 HNDTQTSLQC DIWNGIERDG SAKEDLQPSG LSAQGWYDDL LDTILGDGSS

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MGEVCEGVKF VDIHVLLVDD DATSLAVVSA MLRVCKYQVV TLKNPMEALD TLRARKGFFH  60
LLVTDLHMPQ LSGLQLQKQV MQEFKLPVIM MSADEKPSVI LKSLEEGVAF YMVKPISLND  120
VKHVWQYAIT PKKVSPDQTR TIIPHELSIQ IQKSSFKNSS SSPSCSRREI KSKSAEPKNK  180
KAKESKVAKN SIAIRKPKVI WTNSLHNRFL QAIKLIGLDK AVPKKILEFM NVPGLTRENV  240
ASHLQKYRIF LKRVAEKGAR SMKIYCDNVL QRSNSAAPHV QYPLYRSKLQ AQHPNFPQNQ  300
RLMAPINNQC PSLGSFKQPT PQNPNLEGAS MENPLAHFWN QKYSTLLTIN KLNFPNFNGD  360
QNFVLVRNEN PKCSSDGTGR TTGEDRMICS SRNGVCNVQA SDDLNNGGCA SIGSYFGQFE  420
GRNQLLPVVS NINVEKNVLV SSEEEVGNDN IWKAANESNA FGDIGEDQSY FDVLSDIFMG  480
HNDTQTSLQC DIWNGIERDG SAKEDLQPSG LSAQGWYDDL LDTILGDGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	2e-38	ARR-B family protein