PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945824.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 297aa MW: 33858.6 Da PI: 6.7562

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945824.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.8e-18	84	137	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_022945824.1 84 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 137 456899***********************************************9 PP
2	HD-ZIP_I/II	130.3	7.6e-42	83	175	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+++a+k++ne+L++++++L++e+++ XP_022945824.1 83 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMA 175 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MTSNGMAFFP ANFMLQTSHE DHDHHHSSPP SLNPILPSCT PQEFHGVASF LGKRSMSFSG 60 AEMVEEGNNG EDEFSDDGSQ AGEKKRRLNM EQVKTLEKNF ELGNKLEPER KMQLARALGL 120 QPRQIAIWFQ NRRARWKTKQ LEKDYDVLKR QFEAMKSDNE ALKSHNQKLQ AEIMALKSRE 180 PTESINLNKE TEGSCSNRSE NSSDNIKLDI SRTPAIDSPH QHQHHPTNRP LFPTSLRPPA 240 LAQLFQTSSR SSDPPKPLDN NNHPQIAKEE SSSLSNMFCG MDDHSGFWPW LEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	140	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-119	HD-ZIP family protein