PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945888.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 455aa MW: 51266.4 Da PI: 5.6229

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945888.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.7	5.1e-32	95	234	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk.... 79 lp+G++F+P+d+e+v +L++kv + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r +t XP_022945888.1 95 LPRGVKFDPSDQEIV-WHLQAKVGIGGsrlhpfI---DefiptVLEDDGICYTHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRkITGddfg 184 799**********.889999987774565442...144444677778******.677888899**************54445655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +W++tg++k+v+ +g ++g+kk++v+y + ++ekt+W mh+y+l XP_022945888.1 185 DVRWHKTGRTKPVVI-DGVQKGCKKIMVLYMSfaKGGRAEKTNWAMHQYHL 234 788********.99********6522666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MKFDQDFVDI SMKHNLFALC IKTQHSPWRC LLGVVFAFCR PSWLVDSNRI ATKIKSASGT 60 SHPRSVEWKS NPSRSCPKCQ HTIDNSDVAQ EWPGLPRGVK FDPSDQEIVW HLQAKVGIGG 120 SRLHPFIDEF IPTVLEDDGI CYTHPQKLPG VKQDGSVSHF FHRAIKAYNT GTRKRRKITG 180 DDFGDVRWHK TGRTKPVVID GVQKGCKKIM VLYMSFAKGG RAEKTNWAMH QYHLGTEEDE 240 RDGEYVISKI FYQQQNVKHG EVTEQEIPQI VNAVKVDPRT PKSATPEPPR VECRCVNVDQ 300 ERDSVVISTS ALVEVPSESD KSDKHDTIKL DGCSVEVIDD NENNIDEEPK WWEGESQNIL 360 DSQQLVEALS LCDDLLQSQS PPRDGNTNNG ASRSKSLFSE YSKLGPEDLK KDLEECQNLV 420 LDPGNIELDT PPEFRLSQLD FGSQESFSAW GGKAE

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MKFDQDFVDI SMKHNLFALC IKTQHSPWRC LLGVVFAFCR PSWLVDSNRI ATKIKSASGT  60
SHPRSVEWKS NPSRSCPKCQ HTIDNSDVAQ EWPGLPRGVK FDPSDQEIVW HLQAKVGIGG  120
SRLHPFIDEF IPTVLEDDGI CYTHPQKLPG VKQDGSVSHF FHRAIKAYNT GTRKRRKITG  180
DDFGDVRWHK TGRTKPVVID GVQKGCKKIM VLYMSFAKGG RAEKTNWAMH QYHLGTEEDE  240
RDGEYVISKI FYQQQNVKHG EVTEQEIPQI VNAVKVDPRT PKSATPEPPR VECRCVNVDQ  300
ERDSVVISTS ALVEVPSESD KSDKHDTIKL DGCSVEVIDD NENNIDEEPK WWEGESQNIL  360
DSQQLVEALS LCDDLLQSQS PPRDGNTNNG ASRSKSLFSE YSKLGPEDLK KDLEECQNLV  420
LDPGNIELDT PPEFRLSQLD FGSQESFSAW GGKAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-172	NAC family protein