PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945889.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 418aa MW: 46797.1 Da PI: 5.1519

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945889.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.9	4.3e-32	58	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atk.... 79 lp+G++F+P+d+e+v +L++kv + + v+++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r +t XP_022945889.1 58 LPRGVKFDPSDQEIV-WHLQAKVGIGGsrlhpfI---DefiptVLEDDGICYTHPQKLP-GVKQDGSVSHFFHRAIKAYNTGTRKRRkITGddfg 147 799**********.889999987774565442...144444677778******.677888899**************54445655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 + +W++tg++k+v+ +g ++g+kk++v+y + ++ekt+W mh+y+l XP_022945889.1 148 DVRWHKTGRTKPVVI-DGVQKGCKKIMVLYMSfaKGGRAEKTNWAMHQYHL 197 788********.99********6522666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MAGPSWLVDS NRIATKIKSA SGTSHPRSVE WKSNPSRSCP KCQHTIDNSD VAQEWPGLPR 60 GVKFDPSDQE IVWHLQAKVG IGGSRLHPFI DEFIPTVLED DGICYTHPQK LPGVKQDGSV 120 SHFFHRAIKA YNTGTRKRRK ITGDDFGDVR WHKTGRTKPV VIDGVQKGCK KIMVLYMSFA 180 KGGRAEKTNW AMHQYHLGTE EDERDGEYVI SKIFYQQQNV KHGEVTEQEI PQIVNAVKVD 240 PRTPKSATPE PPRVECRCVN VDQERDSVVI STSALVEVPS ESDKSDKHDT IKLDGCSVEV 300 IDDNENNIDE EPKWWEGESQ NILDSQQLVE ALSLCDDLLQ SQSPPRDGNT NNGASRSKSL 360 FSEYSKLGPE DLKKDLEECQ NLVLDPGNIE LDTPPEFRLS QLDFGSQESF SAWGGKAE

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MAGPSWLVDS NRIATKIKSA SGTSHPRSVE WKSNPSRSCP KCQHTIDNSD VAQEWPGLPR  60
GVKFDPSDQE IVWHLQAKVG IGGSRLHPFI DEFIPTVLED DGICYTHPQK LPGVKQDGSV  120
SHFFHRAIKA YNTGTRKRRK ITGDDFGDVR WHKTGRTKPV VIDGVQKGCK KIMVLYMSFA  180
KGGRAEKTNW AMHQYHLGTE EDERDGEYVI SKIFYQQQNV KHGEVTEQEI PQIVNAVKVD  240
PRTPKSATPE PPRVECRCVN VDQERDSVVI STSALVEVPS ESDKSDKHDT IKLDGCSVEV  300
IDDNENNIDE EPKWWEGESQ NILDSQQLVE ALSLCDDLLQ SQSPPRDGNT NNGASRSKSL  360
FSEYSKLGPE DLKKDLEECQ NLVLDPGNIE LDTPPEFRLS QLDFGSQESF SAWGGKAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-176	NAC family protein