PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945890.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 342aa MW: 37789.7 Da PI: 8.6156

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945890.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.6	2.1e-31	200	255	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r+rW++eLH+rFv+a+++LGG+++AtPk+i+elmkv++Lt+++vkSHLQkYRl+ XP_022945890.1 200 KRRRRWSSELHRRFVRALQRLGGPQVATPKQIRELMKVDDLTNDEVKSHLQKYRLH 255 689***************************************************97 PP
2	Myb_DNA-binding	43.1	1e-13	202	253	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r rW+ e++ ++v+a ++lGg+ t+k I + m +t ++ks++qky+ XP_022945890.1 202 RRRWSSELHRRFVRALQRLGGPqvaTPKQIRELMKvDDLTNDEVKSHLQKYR 253 78********************************99***********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MDFPDNVVDI RVGMDLRHYV DALDQERRKI LVFQRELPLC VELVTRAIDS CRQQLSGVLS 60 ESSEHTSSDG PVLEEFIPVR KDSGDPNFEQ SKPDINEVGP LDWLKSAQLW NQTSDPPVVE 120 DVAKKPPSAV VEEEKKGVGG GFQPFQEKNP SETEAAAVVG KTVCCSPVME ATASSTVETV 180 SKGSGGNSQR EEKESQTQRK RRRRWSSELH RRFVRALQRL GGPQVATPKQ IRELMKVDDL 240 TNDEVKSHLQ KYRLHARRPT NSAMHDSAVQ KFVVVGSMWE PPPPPPKYMA MTTGQVTPVA 300 RVVQRQKTAE GGKGRPIGGM VQLNSPPASY STLTATTSPA KA

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MDFPDNVVDI RVGMDLRHYV DALDQERRKI LVFQRELPLC VELVTRAIDS CRQQLSGVLS  60
ESSEHTSSDG PVLEEFIPVR KDSGDPNFEQ SKPDINEVGP LDWLKSAQLW NQTSDPPVVE  120
DVAKKPPSAV VEEEKKGVGG GFQPFQEKNP SETEAAAVVG KTVCCSPVME ATASSTVETV  180
SKGSGGNSQR EEKESQTQRK RRRRWSSELH RRFVRALQRL GGPQVATPKQ IRELMKVDDL  240
TNDEVKSHLQ KYRLHARRPT NSAMHDSAVQ KFVVVGSMWE PPPPPPKYMA MTTGQVTPVA  300
RVVQRQKTAE GGKGRPIGGM VQLNSPPASY STLTATTSPA KA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	198	204	QRKRRRR
2	199	203	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	5e-53	G2-like family protein