PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945896.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family RAV
Protein Properties Length: 334aa    MW: 36905.4 Da    PI: 9.8447
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945896.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.24.2e-134290155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s++kGV   + +grW A+I++      ++r++lg+f  ++eAa+a++ a+++++g
  XP_022945896.1 42 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEDEAARAYDVAAQRFRG 90
                    689***9788.8*********3.....5**********99*************98 PP
2B3924.4e-29170273195
                     EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     f+k+ tpsdv+k++rlv+pk++ae++         +  + ++  l +ed  g++W+++++y+++s++yvltkGW++Fvk+++L +gD+v F  + 
  XP_022945896.1 170 FEKAVTPSDVGKLNRLVIPKQHAEKNfplqtgsagSAASSKGLLLNFEDGVGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLTAGDVVSFLKST 264
                     89*************************9999997633334677899999999***************************************9544 PP

                     SSEE..EEE CS
              B3  87 rsefelvvk 95 
                      ++++l++ 
  XP_022945896.1 265 GEDKQLYIE 273
                     477767665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDQPTTSIKS PPPDTSLVLD SADSSSAVGG GVEAESRKLP SSRFKGVVPQ PNGRWGAQIY  60
EKHQRVWLGT FNEEDEAARA YDVAAQRFRG RDAVTNFKTL SHGQVDDVVS AFLNSHSKAE  120
IVDMLRKHTY LDELHQSKRN ADLLSSDRKR NGSLLPGSDN EPDSARELLF EKAVTPSDVG  180
KLNRLVIPKQ HAEKNFPLQT GSAGSAASSK GLLLNFEDGV GKVWRFRYSY WNSSQSYVLT  240
KGWSRFVKEK NLTAGDVVSF LKSTGEDKQL YIEWKASKSA ASTGSNTNPV QTVRLFGVDI  300
MKVTPSSGCG EKRRREMEFL SSECNKKQRI VGAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.21e-125RAV family protein