PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022945919.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 230aa MW: 24123.8 Da PI: 10.1766

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022945919.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.2	1.4e-38	29	118	2	92
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaak 92 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ + s s+ ++ ss++ +++ XP_022945919.1 29 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-SISLSVRGNGSSASLSST 118 78*******************************************************************877.233333333233332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MSNSETADSS NGAAIDTHKN QPSSNGALAV KKPPSKDRHS KVDGRGRRIR MPIICAARVF 60 QLTRELGHKS DGQTIEWLLR QAEPSIIAAT GTGTTPANFS SISLSVRGNG SSASLSSTTS 120 TLSLSRPQPF ILGKRVRADD DGGTDDGLGV GPSGYWAIPA RPDYGQVWSF AAAAAAEQRI 180 SQPASLFAQQ QQPIREASAA RVGNYLPGHL NLLASLSGGG GAGRREDDCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-65	TCP family protein