PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022946027.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 260aa    MW: 29890.8 Da    PI: 4.2797
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022946027.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.7e-1978131356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ +q++ Le+ Fe ++++  e++++LAk+lgL+ rqV +WFqNrRa+ k
  XP_022946027.1  78 KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCK 131
                     566899**********************************************99 PP
2HD-ZIP_I/II126.89.3e-4178169293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     kkrrls +qv++LE+sFe e+kLeperK++la+eLglqprqva+WFqnrRAR ktkqlEkdy +Lk++yd+lk++ e L +e+eeL++e+++
  XP_022946027.1  78 KKRRLSVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARCKTKQLEKDYLSLKTSYDNLKSSYEDLVREKEELETEIRN 169
                     9**************************************************************************************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKEQSLSLLC FFFSLFELLI LHVTLCFSLF LSATAMADGA VYAPPSSDVL DSLIIPGEFI  60
GETNEDELLD GIWRQASKKR RLSVDQVQFL EKSFEVENKL EPERKTQLAK ELGLQPRQVA  120
IWFQNRRARC KTKQLEKDYL SLKTSYDNLK SSYEDLVREK EELETEIRNL EERLAIGEKG  180
KRIDCCWENQ NSSMADSSHG FETELSDCFS QVEEENLSGD LLPICFPKLE SCYYDDDLTD  240
GCCNLIGFQI QDQPLGFWPC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126134RRARCKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-35HD-ZIP family protein