PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946252.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 617aa MW: 68138.6 Da PI: 5.9656

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946252.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.1e-13	445	491	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_022946252.1 445 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 491 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MKIEDGLRGV GGKDEDKTVV AAVLGTRAFN YMMSCSVSNE NLFMAVRNDD NLQNKLADLV 60 ETPNASNFCW NYAIFWQLSH SKSGQWVLGW GDGSFRDPRD GEGTEATQIL SLELEDESQQ 120 RMKKRALQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPGGEGG PGKCFASGKH 180 VWHLDVLNSP AEYCVRSYLA KSAGIRTVVL VPTDVGVVEL GSVRSVSESL ELVHLIRSLF 240 SSQRSLDGVR TSAVMSRMAE RKDENALFPS LGIAERGGGG VPKVFGQSLN SGNVGRSHFR 300 EKLAVRKMDE RAWEVCPNGG RIQFQSPRNG IRNPSLGHVH LLKPGNPTET LGSPTPPVNN 360 NHEQLVNGVR DEFCLNPYQS QKIAQMQIDF SVATPRPPSV MNRVGADSEQ LDIEPQCKEE 420 GPGTDERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL 480 GDAIAYINEL QSKVKAMEYE REQSGVTSSE ATPSETNPEI ENKDQFLDVD IDVEAGNDEV 540 VVKVSCPLES HPASRVIKAM KNAQINVVDS KLSVEVNDTV LHTFTIKSPG SEQLTKEELI 600 ATISRDSTPL HPLSTVG

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MKIEDGLRGV GGKDEDKTVV AAVLGTRAFN YMMSCSVSNE NLFMAVRNDD NLQNKLADLV  60
ETPNASNFCW NYAIFWQLSH SKSGQWVLGW GDGSFRDPRD GEGTEATQIL SLELEDESQQ  120
RMKKRALQKL HTLFGGSDED NYALGLDRVT DTEMFFLASM YFSFPGGEGG PGKCFASGKH  180
VWHLDVLNSP AEYCVRSYLA KSAGIRTVVL VPTDVGVVEL GSVRSVSESL ELVHLIRSLF  240
SSQRSLDGVR TSAVMSRMAE RKDENALFPS LGIAERGGGG VPKVFGQSLN SGNVGRSHFR  300
EKLAVRKMDE RAWEVCPNGG RIQFQSPRNG IRNPSLGHVH LLKPGNPTET LGSPTPPVNN  360
NHEQLVNGVR DEFCLNPYQS QKIAQMQIDF SVATPRPPSV MNRVGADSEQ LDIEPQCKEE  420
GPGTDERRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN ISKMDKASLL  480
GDAIAYINEL QSKVKAMEYE REQSGVTSSE ATPSETNPEI ENKDQFLDVD IDVEAGNDEV  540
VVKVSCPLES HPASRVIKAM KNAQINVVDS KLSVEVNDTV LHTFTIKSPG SEQLTKEELI  600
ATISRDSTPL HPLSTVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	427	435	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein