PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946337.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 456aa MW: 50459 Da PI: 7.3924

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946337.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.4	2.5e-31	255	310	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_022946337.1 255 KARRYWSPDLHRRFVNALQTLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 310 689***************************************************97 PP
2	Myb_DNA-binding	39.3	1.5e-12	257	308	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a + lGg t+k I + m g+t ++ks++qky+ XP_022946337.1 257 RRYWSPDLHRRFVNALQTLGGSqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 308 567***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDWKDHSYFM LLKSFVCVEE DHSHSQTQLQ DLLSCLEGER LKIDAFKREL PLCMHLLNNA 60 LESCRQQVQA WRVKSKIHQQ NGEKPVVEEF IPLKQSTSQP SQTLSNISDR SNWMTSAQLW 120 SQTTNDESKP NLSSSKQQQQ PIDHQIGFIQ KLHTNSNNGG AFLPFSKDSI LSNTHNSTPP 180 QLPDLALAAA PATGGGNRQE FDGNKCGNSD HRQPENGRMV TGKVNLGGEG EVITSNNANN 240 NNITNNSTTQ NSHRKARRYW SPDLHRRFVN ALQTLGGSQV ATPKQIRELM KVDGLTNDEV 300 KSHLQKYRLH TRRPSPSPQA AGAPAAQLVV LGGIWVPPDY AAHGGAPALY GPHPTTYCGP 360 PVHQDFYPPL PHHQLHHQHM LHQQLQMYKA ATAQPQISPD SDERGNGDRS ESIEDGGKSE 420 SGSWKVESGG EGKGNLAALR QEGGDESNGR EITLKF

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDWKDHSYFM LLKSFVCVEE DHSHSQTQLQ DLLSCLEGER LKIDAFKREL PLCMHLLNNA  60
LESCRQQVQA WRVKSKIHQQ NGEKPVVEEF IPLKQSTSQP SQTLSNISDR SNWMTSAQLW  120
SQTTNDESKP NLSSSKQQQQ PIDHQIGFIQ KLHTNSNNGG AFLPFSKDSI LSNTHNSTPP  180
QLPDLALAAA PATGGGNRQE FDGNKCGNSD HRQPENGRMV TGKVNLGGEG EVITSNNANN  240
NNITNNSTTQ NSHRKARRYW SPDLHRRFVN ALQTLGGSQV ATPKQIRELM KVDGLTNDEV  300
KSHLQKYRLH TRRPSPSPQA AGAPAAQLVV LGGIWVPPDY AAHGGAPALY GPHPTTYCGP  360
PVHQDFYPPL PHHQLHHQHM LHQQLQMYKA ATAQPQISPD SDERGNGDRS ESIEDGGKSE  420
SGSWKVESGG EGKGNLAALR QEGGDESNGR EITLKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	2e-46	G2-like family protein