PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946498.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 371aa MW: 41391.6 Da PI: 6.1418

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946498.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.1	1.8e-35	80	171	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk+ye++ed+e++ ++swse nsf+v+d+++++ ++LpkyFkhsnf+SF+RQLn+YgF+k+++++ weF+++ F+ gkk+ll++ XP_022946498.1 80 FLKKTYEMVEDPETDPVVSWSEGRNSFIVWDSHKLSITLLPKYFKHSNFSSFIRQLNTYGFRKIDSDK---------WEFANEGFQGGKKHLLKN 165 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_022946498.1 166 IKRRSR 171 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MINQTTLSGG GGGGGGCPDG AATASGDIMD QRTVKEEEME VSTETMEGGG GESGGGDGGW 60 ASSATAKPME GLHEVGPAPF LKKTYEMVED PETDPVVSWS EGRNSFIVWD SHKLSITLLP 120 KYFKHSNFSS FIRQLNTYGF RKIDSDKWEF ANEGFQGGKK HLLKNIKRRS RYNNYKKQQQ 180 HLGLQDLSNH SLVEAELQAL KSDNNILRVE MLKLRDQQQD SHNHLTMVED RVRCVESKYQ 240 QMLSFVSKMS RDPGFCRQLV QRRMLRKKLI NNGDEFGNNR SLLAMQAHQN LTHSELITTE 300 MIPQAIEPGP VVLEPPVRPS TMVVDEDSDS KFFLELEDLI QKPPPPPPPP QDCPSGYGQQ 360 QAFHGFVGSI P

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MINQTTLSGG GGGGGGCPDG AATASGDIMD QRTVKEEEME VSTETMEGGG GESGGGDGGW  60
ASSATAKPME GLHEVGPAPF LKKTYEMVED PETDPVVSWS EGRNSFIVWD SHKLSITLLP  120
KYFKHSNFSS FIRQLNTYGF RKIDSDKWEF ANEGFQGGKK HLLKNIKRRS RYNNYKKQQQ  180
HLGLQDLSNH SLVEAELQAL KSDNNILRVE MLKLRDQQQD SHNHLTMVED RVRCVESKYQ  240
QMLSFVSKMS RDPGFCRQLV QRRMLRKKLI NNGDEFGNNR SLLAMQAHQN LTHSELITTE  300
MIPQAIEPGP VVLEPPVRPS TMVVDEDSDS KFFLELEDLI QKPPPPPPPP QDCPSGYGQQ  360
QAFHGFVGSI P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	163	169	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-76	HSF family protein