PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946586.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 436aa MW: 48451.9 Da PI: 6.9023

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946586.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	112.3	5.4e-35	47	194	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra....... 77 lp+G++F+Ptd+el+ e+L++kve+k+ + +e+i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ XP_022946586.1 47 LPAGVKFDPTDQELI-EHLEAKVEAKNdikshplI--DEFIPTLDgedgICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdi 137 799**********.99***9987775332..234555545556******.555666799**************86777777 PP NAM 78 .....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_022946586.1 138 qggggGGETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 194 7766544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MNMKSNLGSI TSSDLIDAKL EEHQKCGSKQ CPGCGHKLEV KSDWLGLPAG VKFDPTDQEL 60 IEHLEAKVEA KNDIKSHPLI DEFIPTLDGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA 120 YTTGTRKRRK IQTECDIQGG GGGGETRWHK TGKTRPVMVN GRQKGCKKIL VLYTNFGKNR 180 KPEKTNWVMH QYHLGQHEEE REGELVVSKI FYQTQPRQCN WSSSDKAAAE VTGDNVLLSK 240 RENVSGSYSS SRQMATHQRD DISPVGGGGG LCPPPHFAAT YGGLDHIQPF KADHFSFGPF 300 RRTFDETGIG EAAPGEGIGD HHHHHCHHLS VATTAFQITR PSNPISTIIC PSSLHHSSII 360 LDHDSYQVSQ NESFQQQQHH HDKLGGRSAS GLEELIMGCS SSNIKEESTM GNNSEEAAEW 420 MKFSPFWPEP DNPNHD

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MNMKSNLGSI TSSDLIDAKL EEHQKCGSKQ CPGCGHKLEV KSDWLGLPAG VKFDPTDQEL  60
IEHLEAKVEA KNDIKSHPLI DEFIPTLDGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA  120
YTTGTRKRRK IQTECDIQGG GGGGETRWHK TGKTRPVMVN GRQKGCKKIL VLYTNFGKNR  180
KPEKTNWVMH QYHLGQHEEE REGELVVSKI FYQTQPRQCN WSSSDKAAAE VTGDNVLLSK  240
RENVSGSYSS SRQMATHQRD DISPVGGGGG LCPPPHFAAT YGGLDHIQPF KADHFSFGPF  300
RRTFDETGIG EAAPGEGIGD HHHHHCHHLS VATTAFQITR PSNPISTIIC PSSLHHSSII  360
LDHDSYQVSQ NESFQQQQHH HDKLGGRSAS GLEELIMGCS SSNIKEESTM GNNSEEAAEW  420
MKFSPFWPEP DNPNHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-157	NAC family protein