PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946732.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 372aa MW: 42322.1 Da PI: 8.9013

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946732.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022946732.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119 79***************************************987 PP
2	QLQ	56.2	1e-19	8	38	2	32
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 +FTaaQ+q+L++Q+l++Ky++++ PvPp+Ll XP_022946732.1 8 PFTAAQWQELEHQALIFKYMVSGIPVPPDLL 38 8****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MSARNRLPFT AAQWQELEHQ ALIFKYMVSG IPVPPDLLYT MKRSSLDTPF ISRLFPHQYP 60 DVGWNFVQMG SGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV 120 LKPTATITAL TSNPSTPPIS SITHNSTASL STNSFPSEIH THSCFNTPPP PHPFLYQHGS 180 FSRPPGSAHF QHNSNPSLLL DPPADYRRNR YVYGAKEDVD KHPFVSEEHS GNMRGFSASS 240 MEDPWQLTPL TMSCSSSSPR HKNCSALQGD YSSYLQLQSF GGSPKQVKQD EHYYAVGKYN 300 EMQSKMDREK PEKTMHHFFG EWSPKDRESW VDLDDKSSNT GSVSETRLSM SILNSSQHDF 360 SSIFGSNKHN EN

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MSARNRLPFT AAQWQELEHQ ALIFKYMVSG IPVPPDLLYT MKRSSLDTPF ISRLFPHQYP  60
DVGWNFVQMG SGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVEV  120
LKPTATITAL TSNPSTPPIS SITHNSTASL STNSFPSEIH THSCFNTPPP PHPFLYQHGS  180
FSRPPGSAHF QHNSNPSLLL DPPADYRRNR YVYGAKEDVD KHPFVSEEHS GNMRGFSASS  240
MEDPWQLTPL TMSCSSSSPR HKNCSALQGD YSSYLQLQSF GGSPKQVKQD EHYYAVGKYN  300
EMQSKMDREK PEKTMHHFFG EWSPKDRESW VDLDDKSSNT GSVSETRLSM SILNSSQHDF  360
SSIFGSNKHN EN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-55	GRF family protein