PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946899.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 171aa MW: 19760.4 Da PI: 9.5819

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946899.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.7	1.9e-56	23	151	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s XP_022946899.1 23 LPPGFRFHPTDEELITYYLLKKVLDSSFSG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSV 116 79***********************999.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_022946899.1 117 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 151 45677**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MDVSSFSRHD SAAAAADHHP HHLPPGFRFH PTDEELITYY LLKKVLDSSF SGRAIAEVDL 60 NKCEPWELPE KAKMGEKEWY FFSLRDRKYP TGLRTNRATE AGYWKATGKD REIYSVKTCS 120 LVGMKKTLVF YRGRAPKGEK SNWVMHEYRL EGKFAYHYLS TNSKVLPFSS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	9e-94	NAC family protein