PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946906.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 174aa MW: 19489.2 Da PI: 10.8068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946906.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	18	63	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+++W++Ia++++ gR++k+c++rw++ XP_022946906.1 18 RGHWRPAEDTKLKELVALHGPHNWNLIAHKLQ-GRSGKSCRLRWLNQ 63 899***************************.*********996 PP
2	Myb_DNA-binding	50	6.7e-16	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T++E+e+l +a+ +G++ W+ I+r ++ gRt++ +k++w+ XP_022946906.1 70 RTAFTEQEEERLMQAHGIYGNK-WAMISRLFP-GRTDNGVKNHWHV 113 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MATETDPTKH SNGSLCGRGH WRPAEDTKLK ELVALHGPHN WNLIAHKLQG RSGKSCRLRW 60 LNQLDPRINR TAFTEQEEER LMQAHGIYGN KWAMISRLFP GRTDNGVKNH WHVIMARKCR 120 QQHIASYTRR NRFSQPPPPP PPPPPPPPPP PPSSGGGLEG GEPAFIDFLG VGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	3e-69	MYB family protein