PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022946977.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 302aa    MW: 33617.6 Da    PI: 6.5895
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022946977.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.61.4e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +l  ++ q+G+++W++I++  g+ R++k+c++rw +yl
   XP_022946977.1 14 RGQWTPEEDNKLSSYISQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61
                     89********************************************97 PP
2Myb_DNA-binding46.68.1e-1568110246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++  E++ +v+++   G++ W++Ia+ ++ gRt++++k++w++
   XP_022946977.1  68 GQFSDMEEQTIVKLHSVVGNR-WSLIAAQLP-GRTDNDVKNHWNT 110
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGRIPCCEKE NVKRGQWTPE EDNKLSSYIS QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY  60
LRPDLKHGQF SDMEEQTIVK LHSVVGNRWS LIAAQLPGRT DNDVKNHWNT KLKKKLSAPP  120
QVAHLAEAAL GCFKDEMLHL LTKKCVDFQL QQANVPPGSS SGTYNHNNQN EKDGTVENIK  180
LGLSRAIQQS DLITPYKPWN STDATTTNLE GTSNCFPAST SGFQYPPPSF GNEGDVPSWS  240
QSMCTGSTCT GGEQQGQLHE ILEEHGEELS EGGKEMRNGT SIFSSDSVLW DLPCDDLMNP  300
IV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.17e-95MYB family protein