PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947007.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 446aa MW: 52999.2 Da PI: 8.2767

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947007.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.3	3.8e-15	84	160	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 lp+kf+ ++ + + tl+ ++g Wev+l +k++g++ +++GW eFv+ ++k+g fvvF+l+g+++f +v +f+ XP_022947007.1 84 DLPNKFVINNRAS-LLHNNATLTLPDGANWEVEL--KKSDGKVSFARGWPEFVEFYNVKAGYFVVFRLEGNRCF--NVLIFD 160 599**999433.45667999999*****..***********************************9..888887 PP
2	B3	66	5.5e-21	345	443	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl..iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 f ++ ps+ + + l+lp++fae++ + es++++le +gr W+v + ++ +++r+ l+ GWk+F+ +n+LkegD++vF+l++r + + XP_022947007.1 345 FMVTMRPSYIQTGNYLSLPRSFAERYL-Q--ESTDVKLEVADGRIWSVWCgvRWAFTRRRTELKCGWKRFAVDNQLKEGDVCVFELMNRiPKVFF 436 778999******************4.4..5679*********98667778888899***********************99988889 PP EEEEE-S CS B3 93 vvkvfrk 99 +v++fr+ XP_022947007.1 437 KVTIFRR 443 9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MINFGRVLHD FIDYCCVFTI NNKQKPNLKH KQSLRMAFFT SPIPHFFKII LHHTLIERKL 60 VSNLIQSTFS LIPSFSYQFL FLQDLPNKFV INNRASLLHN NATLTLPDGA NWEVELKKSD 120 GKVSFARGWP EFVEFYNVKA GYFVVFRLEG NRCFNVLIFD LSATEIDYPI KPRIFRRLRK 180 DHTRAFDRRP PILLPKSENE DDEDDSVVVL NDAVSRKRKR EKDHEAAFCS LREMKKMMRT 240 NMKIKHQRFT TPQRFSDDEE EDEDEDEDED EEEEEDEEDD EEEDYSWRQR KYRGSARNHE 300 DGGRFSPESM RPMHPPRTPK PLTENQERVL RIASSFKLRT KNPSFMVTMR PSYIQTGNYL 360 SLPRSFAERY LQESTDVKLE VADGRIWSVW CGVRWAFTRR RTELKCGWKR FAVDNQLKEG 420 DVCVFELMNR IPKVFFKVTI FRRPAN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MINFGRVLHD FIDYCCVFTI NNKQKPNLKH KQSLRMAFFT SPIPHFFKII LHHTLIERKL  60
VSNLIQSTFS LIPSFSYQFL FLQDLPNKFV INNRASLLHN NATLTLPDGA NWEVELKKSD  120
GKVSFARGWP EFVEFYNVKA GYFVVFRLEG NRCFNVLIFD LSATEIDYPI KPRIFRRLRK  180
DHTRAFDRRP PILLPKSENE DDEDDSVVVL NDAVSRKRKR EKDHEAAFCS LREMKKMMRT  240
NMKIKHQRFT TPQRFSDDEE EDEDEDEDED EEEEEDEEDD EEEDYSWRQR KYRGSARNHE  300
DGGRFSPESM RPMHPPRTPK PLTENQERVL RIASSFKLRT KNPSFMVTMR PSYIQTGNYL  360
SLPRSFAERY LQESTDVKLE VADGRIWSVW CGVRWAFTRR RTELKCGWKR FAVDNQLKEG  420
DVCVFELMNR IPKVFFKVTI FRRPAN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	222	RKRKREK
2	216	245	RKRKREKDHEAAFCSLREMKKMMRTNMKIK
3	217	246	RKRKREKDHEAAFCSLREMKKMMRTNMKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	8e-19	B3 family protein