PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947034.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 270aa    MW: 30458.3 Da    PI: 9.1501
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947034.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.61.3e-32401821128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 
                     lp+G++F+Ptd+e++  +L+ kv  + ++l+        +i+   +i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+          
  XP_022947034.1  40 LPAGVKFDPTDQEIL-LHLEGKVGCDAHKLHPlidefipTIQWEhGICYTHPQKLP-GVRKDGLVRHFFHRPSKAYTTGTRKRRKvhadntegEG 132
                     799***********9.88****999884442233333333443347**********.566666788******************85666654433 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+++vl+ +g+++g kk+Lv+y   g+++k+ekt+W+mh+y+l
  XP_022947034.1 133 ETRWHKTGKTRPVLV-GGRVKGYKKILVLYtnYGKQKKPEKTNWIMHQYHL 182
                     778************.9*************6658999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MTEFVDKYVT NSSSSCPSCG HHQIKSPEKC GAGIHILPGL PAGVKFDPTD QEILLHLEGK  60
VGCDAHKLHP LIDEFIPTIQ WEHGICYTHP QKLPGVRKDG LVRHFFHRPS KAYTTGTRKR  120
RKVHADNTEG EGETRWHKTG KTRPVLVGGR VKGYKKILVL YTNYGKQKKP EKTNWIMHQY  180
HLGGSEEEKD GELVVSKVFY QTQPRQCGNS VKKDHNRHQD SSSCNNNPNP LVDFYNPSFV  240
YFESSDQNRS ASNSHMIPQF AVHDGSSAVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-114NAC family protein