PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947078.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 392aa MW: 43348.9 Da PI: 6.7119

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947078.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.5	3e-28	134	188	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++v+SHLQkYR++ XP_022947078.1 134 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIECLTRHNVASHLQKYRSH 188 5689***************.******************************86 PP
2	Myb_DNA-binding	40.6	6e-13	137	186	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg + +t+ ++ s++qky+ XP_022947078.1 137 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiECLTRHNVASHLQKYR 186 57******************************999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MLAVRIGNKD EEQGEVDSFS IAAEGFPDFH DDTHLLDSIN FDDLFVGIND GDVLPDLEMD 60 HELLAQFSVN NSVSFEQFDD NSKSVNKDEG EEEGKAHGDQ EIVSKIDELA AKSKSGDKIN 120 KSSPQSKNSQ GKRKVKVDWT PELHRRFVQA VEQLGVDKAV PSRILELMGI ECLTRHNVAS 180 HLQKYRSHRK HLLAREAEAA SWSQRRQMYG GAAVNGGGKR ELSSWGAPTT MGFPPMHPHF 240 RPLNVWPKYL QHSPSPPPPP ALSWPYAAAP PPPHDPSYWH HHHHQRVPNA LTPGTPCFPH 300 SLPTNTRFGG AMFSVIPPPH PPYKLDLITI GCSLPHPPLD SYPSKESIDS AIGDALAKPW 360 LPLPLGLKPP SLDSVKVELQ RQGIPRIPPS CA

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MLAVRIGNKD EEQGEVDSFS IAAEGFPDFH DDTHLLDSIN FDDLFVGIND GDVLPDLEMD  60
HELLAQFSVN NSVSFEQFDD NSKSVNKDEG EEEGKAHGDQ EIVSKIDELA AKSKSGDKIN  120
KSSPQSKNSQ GKRKVKVDWT PELHRRFVQA VEQLGVDKAV PSRILELMGI ECLTRHNVAS  180
HLQKYRSHRK HLLAREAEAA SWSQRRQMYG GAAVNGGGKR ELSSWGAPTT MGFPPMHPHF  240
RPLNVWPKYL QHSPSPPPPP ALSWPYAAAP PPPHDPSYWH HHHHQRVPNA LTPGTPCFPH  300
SLPTNTRFGG AMFSVIPPPH PPYKLDLITI GCSLPHPPLD SYPSKESIDS AIGDALAKPW  360
LPLPLGLKPP SLDSVKVELQ RQGIPRIPPS CA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	5e-68	G2-like family protein