PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947079.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 328aa    MW: 36574.8 Da    PI: 4.8859
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947079.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.7e-10153200455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_022947079.1 153 SHSLAERARREKISERMKYLQNLVPGC----NKIAGKAGMLDEIINYVQSLQ 200
                     79*************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MLSKSEMTMS EKQRTPVKWR RSHGDCHSLS PVSNQASRVN DFQDLLAPGG WPELTKYEFS  60
STETCSPPPE ANSVAVGEIP KKRKANKNKE LKSKLGNAES DKRIKPNNQE EEQQQSKITE  120
ETEETEETET SKQSSRASDY VHVRARPGQA TDSHSLAERA RREKISERMK YLQNLVPGCN  180
KIAGKAGMLD EIINYVQSLQ QQVEFLSMKL ATANPRLDFI NVDDPFCKQV FPATEISPET  240
ATSSSYFNEL GISSSSVTVP QTPLISSASV TQLELCSTWG DDLQRVCSMS LEEGGPPLLS  300
LSSFLWQQYP GIEDEKETFV DDKVVGPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-47bHLH family protein