PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947096.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 773aa    MW: 84701.8 Da    PI: 5.3488
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947096.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-20111167157
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k+
  XP_022947096.1 111 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN 167
                     688999************************************************995 PP
2START222.21.7e-693015211206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el ++a+++ep+W++s       +n+de+l++f+++ +     ++ ea+r+s+vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_022947096.1 301 ELAVAAMEELTRMAQLGEPLWMTSLdgstNVLNEDEYLRTFPRGIGpkpsgFKCEASRESAVVIMNHINLVEILMDVN-QWSTLFSgivsRAMTL 394
                     57899********************9999999***********999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m++e+q++splvp R++++vRy++q+ +g+w++vdvS+d  ++ p    + R++++pSg+li++++ng+skvtwvehv
  XP_022947096.1 395 EVLSTGvagnynGALQVMTSEFQVPSPLVPtRESYYVRYCKQHVDGTWAVVDVSLDDLRPTP----GLRCRRRPSGCLIQEMPNGYSKVTWVEHV 485
                     ************************************************************99....6**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+wv tl+rqce+
  XP_022947096.1 486 EVDDRGVHSLYKQLVSSGQAFGAKRWVTTLDRQCER 521
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 773 aa     Download sequence    
MYISYGSVGF FVLSLISNMP AGITTPATTM SSIFGSNGNN VAGFYSSYEL VLPQPSIFDD  60
GKLLPLDMPQ NTSDSDFARI RDDDFDSATK SGSDNNHELA SGDDQDPRPK KKRYHRHTQH  120
QIQEMEAFFK ECPHPDDKQR KELSRELGLE PLQVKFWFQN KRTQMKNQHE RHENTQLRTE  180
NEKLRADNMR YREALSNASC PNCGGPTAIG EMSFDEHHLR LENARLREEI DRISAIAAKY  240
VGKPVVNYPL LSPPVPSRPL ELGMGNFGPQ SGLGGDIYGS AGDLIRSISA PTEADKPMII  300
ELAVAAMEEL TRMAQLGEPL WMTSLDGSTN VLNEDEYLRT FPRGIGPKPS GFKCEASRES  360
AVVIMNHINL VEILMDVNQW STLFSGIVSR AMTLEVLSTG VAGNYNGALQ VMTSEFQVPS  420
PLVPTRESYY VRYCKQHVDG TWAVVDVSLD DLRPTPGLRC RRRPSGCLIQ EMPNGYSKVT  480
WVEHVEVDDR GVHSLYKQLV SSGQAFGAKR WVTTLDRQCE RLASAMATNI PTGDVGVITN  540
QEGRKSMLKL AERMVISFCA GVSASTTHTW TTLSGTGADD VRVMTRKSID DPGRPPGIVL  600
SAATSFWLPV PPKRIFDFLR DENSRSEWDI LSNGGVVQEM AHIANGRDTG NCVSLLRVNS  660
ANSSQSNMLI LQESCTDPTA SFVIYAPVDI VAMNVVLNGG DPDYVALLPS GFAILPDGTA  720
ETATGGSLLT VAFQILVDSV PTAKLSLGSV ATVNNLIACT AERIKASLSC ETA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein