PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947097.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family YABBY
Protein Properties Length: 194aa    MW: 21509.4 Da    PI: 8.6253
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947097.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY2183e-67221826168
           YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldesl.keelleelkveeenlksnvekeesastsvsse 99 
                     ss+++Cyv+Cn C+t+lavsvP +slfk+vtvrCGhC++ll vn++    ll++ +h++++    + +++   e +n + n +++++   +    
  XP_022947097.1  22 SSDHLCYVHCNVCDTVLAVSVPCASLFKTVTVRCGHCANLLPVNMRGG-MLLPSPNHFHHTAfFSPNAHNFLEEISNPNPNFVMNQTDGIDL--- 112
                     79****************************************998875.6789999998875144555666666666666666655544444... PP

           YABBY 100 klsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168
                      + +   ++vpr+pp ++rP ek+qrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ih+
  XP_022947097.1 113 AMATRVGNDVPRPPPsINRPAEKKQRVPSAYNRFIKEEIQRIKAANPDISHREAFSAAAKNWAHFPHIHN 182
                     457888999***99989****************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
FVKYVSFSLP TTFSQHPPPP PSSDHLCYVH CNVCDTVLAV SVPCASLFKT VTVRCGHCAN  60
LLPVNMRGGM LLPSPNHFHH TAFFSPNAHN FLEEISNPNP NFVMNQTDGI DLAMATRVGN  120
DVPRPPPSIN RPAEKKQRVP SAYNRFIKEE IQRIKAANPD ISHREAFSAA AKNWAHFPHI  180
HNFGVPPNSN NNTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-57YABBY family protein