PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947169.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

LBD

Protein Properties

Length: 221aa MW: 24754 Da PI: 8.4151

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947169.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	111.7	5.3e-35	14	105	1	92
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 aCaaCk++r+kC + C+lapyfpa+q+++f++vhk+FG+snv+k++k+++ee+r++a++slv+eA +r++dPv G +g ++++ ++l+ k XP_022947169.1 14 ACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKM 105 7******************************************************************************9999998887665 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MQRHNLGALQ PAPACAACKH QRKKCHETCP LAPYFPADQN REFQAVHKVF GVSNVTKMVK 60 NVREEDRRKA VESLVWEAVC RQNDPVLGPF GEYKRVLEEL KVCKMGQNQS QSSNPFVGQV 120 GLPCFGGTIS NNGNGIVGLI NGGVNGSHLF NYLHDNLSAI IDSSPYTNSS TYNLQSPEKL 180 MRLHQDHKEI SSTIVVPFQP PPPPQQQQHQ HQQHPNFHHC F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	6e-43	LBD family protein