PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947187.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 542aa MW: 61841.1 Da PI: 7.8151

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947187.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.5	9.8e-11	491	539	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +rW+ E++ l av+++G+g+Wk+I + Rt+ ++k++w++ XP_022947187.1 491 KRWSLLEEDTLRTAVQRFGKGNWKLILNSYReifDDRTEVDLKDKWRNM 539 69*********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MNDHLLKRTL AVMPFPDNDF RLKKTVLLRA IESERSEAVV TEKVLAIFEM IEQLDKTEGL 60 AMMDSMKSAY CAVAVECTVK YLAVEGMKNN GKYFDTVSRI WRGRVMELKR SGRSELVSRE 120 FEEWKDEVEA ALWDKIVWKK LVNMNTRYEA LKLIGDYLGE AWGVLGPSFL ELSASLMDNR 180 TRNEMQSVQL EQAIDKTAVV SEDVGGSGGI EFPSRTENHA RPEHQGSVPV LTRAETKRND 240 VLDMNQDSGV NDNSKRSSTV EMNTERVQEL PTETTEGQES IEKEVTVLQD RSPNCRKNLK 300 TSILPRCKSL ASHKRVRGGA KIDHLEGLEN DSSSGKSTCL QTPEFDRVRE ALKTSSLELQ 360 ALVKDPLPDA LRIAESVAQD LAKKNKTPEH SLEDQNDAVA ANPAINKDNM PLQSMNTAFN 420 NPRHGHQTIV PRPSIMERNS SACTYEWNDS IDGSPERNRA SRLHLPSPKR KVISPLKKYE 480 ENRLVWRRKC KRWSLLEEDT LRTAVQRFGK GNWKLILNSY REIFDDRTEV DLKDKWRNMT 540 RY

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MNDHLLKRTL AVMPFPDNDF RLKKTVLLRA IESERSEAVV TEKVLAIFEM IEQLDKTEGL  60
AMMDSMKSAY CAVAVECTVK YLAVEGMKNN GKYFDTVSRI WRGRVMELKR SGRSELVSRE  120
FEEWKDEVEA ALWDKIVWKK LVNMNTRYEA LKLIGDYLGE AWGVLGPSFL ELSASLMDNR  180
TRNEMQSVQL EQAIDKTAVV SEDVGGSGGI EFPSRTENHA RPEHQGSVPV LTRAETKRND  240
VLDMNQDSGV NDNSKRSSTV EMNTERVQEL PTETTEGQES IEKEVTVLQD RSPNCRKNLK  300
TSILPRCKSL ASHKRVRGGA KIDHLEGLEN DSSSGKSTCL QTPEFDRVRE ALKTSSLELQ  360
ALVKDPLPDA LRIAESVAQD LAKKNKTPEH SLEDQNDAVA ANPAINKDNM PLQSMNTAFN  420
NPRHGHQTIV PRPSIMERNS SACTYEWNDS IDGSPERNRA SRLHLPSPKR KVISPLKKYE  480
ENRLVWRRKC KRWSLLEEDT LRTAVQRFGK GNWKLILNSY REIFDDRTEV DLKDKWRNMT  540
RY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	7e-19	MYB_related family protein