PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947214.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 768aa MW: 85537.1 Da PI: 6.321

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947214.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	6.1e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + XP_022947214.1 52 AWTREEEESFFTALRQVGKN-FEKITCHVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 768 aa Download sequence
MQTDSILSSN SETHLLSETI IAHVGDQGIA ASTPDRVIEP LPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA 180 VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ 240 RRKSGVSSAA YKKWEKAAIA GVSLVADAAE HLERTITNRD VLHDQNTVGE KNSDPVGSPL 300 LLLAPLQPNS LIDVANTKLK LQLFPVDDGT RRALELDKHN PHLELTLSTR KKISSVLEHL 360 SRKWGNSSAA HGALMLFPYS MQKKCLAECQ RWTQDSFESA GDVYAAIGRP QVFRLRYGWC 420 SNAEIGSPEL QTSVPAYCIQ DDHIIDARDI DGRIVDLASI NDQPVGLNKD EVGTLNDNMS 480 TPTVPNETER FICGRLDDLP RSSDPTLNIS WDKKDVADRT FIQRSDDVDD LKLSNETSLS 540 AGEWADSLTN INIGDLLSGV SQDVDPNCID TPLTEGIQCL QQIPFSCDSF DAAIAAHISR 600 QQDKTVSQPT LASHVSSIWD AEETCDAFSF QKNPVILQEV PSSSPFSSLQ GYKHIARTYS 660 MGSSHMAEEL LSDSPPEDHN QGDPMDECQS DPQISETKDL NELADIYWPD SLGPLDLDLP 720 STNKYHSEDL ILGDSLSSLN RLIASSLDAF QNCSFFGFDK KESSTFNS

Sequence ? help Back to Top

Protein Sequence Length: 768 aa Download sequence

MQTDSILSSN SETHLLSETI IAHVGDQGIA ASTPDRVIEP LPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCHVQ SKNKDQVRHY YYRLVRRMNK LLAPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KTVRKRPLQG ENCPPPMPNA  180
VSNQSRALGH DGRAVKLVLV DTQNIPKLGH RKTASRRNVN VGINRGNNGG YPTVLKPSRQ  240
RRKSGVSSAA YKKWEKAAIA GVSLVADAAE HLERTITNRD VLHDQNTVGE KNSDPVGSPL  300
LLLAPLQPNS LIDVANTKLK LQLFPVDDGT RRALELDKHN PHLELTLSTR KKISSVLEHL  360
SRKWGNSSAA HGALMLFPYS MQKKCLAECQ RWTQDSFESA GDVYAAIGRP QVFRLRYGWC  420
SNAEIGSPEL QTSVPAYCIQ DDHIIDARDI DGRIVDLASI NDQPVGLNKD EVGTLNDNMS  480
TPTVPNETER FICGRLDDLP RSSDPTLNIS WDKKDVADRT FIQRSDDVDD LKLSNETSLS  540
AGEWADSLTN INIGDLLSGV SQDVDPNCID TPLTEGIQCL QQIPFSCDSF DAAIAAHISR  600
QQDKTVSQPT LASHVSSIWD AEETCDAFSF QKNPVILQEV PSSSPFSSLQ GYKHIARTYS  660
MGSSHMAEEL LSDSPPEDHN QGDPMDECQS DPQISETKDL NELADIYWPD SLGPLDLDLP  720
STNKYHSEDL ILGDSLSSLN RLIASSLDAF QNCSFFGFDK KESSTFNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.1	0.0	MYB_related family protein