PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947245.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 298aa MW: 33737.6 Da PI: 5.2848

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947245.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.6	8.8e-16	13	61	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEdell++++kq g+ +W++ ++ g+ R++k+c++rw +yl XP_022947245.1 13 KGPWTSEEDELLINYIKQNNGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79**************99889******99**********97 PP
2	Myb_DNA-binding	50.7	4.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++TteE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_022947245.1 67 RGPFTTEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGRAPCCDKG LKKGPWTSEE DELLINYIKQ NNGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TTEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLLCTG 120 IDPQTHEPFN SRSSFSTAPA SPSTRHMAQW ESARLEAEAR LSKESSLFTL LPTERTTDSD 180 FFLQIWNSEI GESFRRCRED KTTCQSQSPI SSSTKYESVF VIATDNVVNY TGGSSAMESY 240 NENEETEYKN FKPIADILMS KSDSSSVNEF EESSDSALEL LLDFPINNDM SFLEENNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-110	MYB family protein