PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022947346.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 363aa MW: 39864.3 Da PI: 8.8259

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022947346.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022947346.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.4e-23	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022947346.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MFHATKKPSS MTSSHDRPMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDQS IKDGMRASAL ELHRNSGSSS 120 TLMDRSMNEM QLEVQRRLHE QIEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAAAA 180 AAAAGRFKTT SNNIGTTTNL VSDAANKAFI SPPPPPPHTF PPFQDINNLF TSEPPAPAPP 240 LIDCLKKPNP FISDTGKTPI FWADDLRLQD LGTPSATLAP PPPPINGSAD LDPQQLEMYE 300 TKPPPLLLSV GNDVMANEKK FDVSLKLEGP SPRHSSGHSD EKVNNNNNPT MSQSQGRNNS 360 HLG

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MFHATKKPSS MTSSHDRPMC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA  60
TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFNDQS IKDGMRASAL ELHRNSGSSS  120
TLMDRSMNEM QLEVQRRLHE QIEVQRHLQL RIEAQGKYMQ SILEKACQTL AGENMAAAAA  180
AAAAGRFKTT SNNIGTTTNL VSDAANKAFI SPPPPPPHTF PPFQDINNLF TSEPPAPAPP  240
LIDCLKKPNP FISDTGKTPI FWADDLRLQD LGTPSATLAP PPPPINGSAD LDPQQLEMYE  300
TKPPPLLLSV GNDVMANEKK FDVSLKLEGP SPRHSSGHSD EKVNNNNNPT MSQSQGRNNS  360
HLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-107	G2-like family protein