PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022947429.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 404aa    MW: 46261.4 Da    PI: 7.3664
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022947429.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3474.5e-1536119695
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     + ++ l+ + l +pkkfa+++g +   s  +tl  ++g +W ++l  ++++++ ++++GW eF + + +++g  +vF+++g+s f+  + 
  XP_022947429.1  36 VVPSILQDKKLKIPKKFAKKFGDD--LSDFVTLVVPNGYRWVLEL--KRHGRSLWFEDGWHEFIRHHCIQVGQLLVFRFEGNSVFN--FY 119
                     3455566677***********988..7779***************..*********************************999994..44 PP
2B3642.3e-20306397499
                     E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     v+ +s+v +   l +p kf e++ +g+   s ++tl+ +sg++W+v++   + + ++ lt+GW +Fv +n+Lke D++vF+l + ++  l+v++f
  XP_022947429.1 306 VMRHSYVRRGFHLHIPSKFSEKYlKGV---SGDITLQVSSGKQWRVRC--VREGPGTKLTRGWANFVMENDLKEEDVCVFELLDIKDIVLKVTIF 395
                     57789999**9************7666...348***************..77777889***********************98779999999999 PP

                     -S CS
              B3  98 rk 99 
                     r+
  XP_022947429.1 396 RA 397
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MENSVTAMAE SNEQHAAQSF DETSPSRKAG LFYKLVVPSI LQDKKLKIPK KFAKKFGDDL  60
SDFVTLVVPN GYRWVLELKR HGRSLWFEDG WHEFIRHHCI QVGQLLVFRF EGNSVFNFYM  120
FNLTSISNGS CNTSNASCEQ SPIALGKEAE CEKLVEIFGY SSPDPSHSSG KKAFCESSEQ  180
QKFHGSSNEA STKNFTHWFE TQNLHPPKDF DYTLEGSDKL QVLRSNGDIG IQFNGDELAK  240
ARENLDFQFS NEIEEGAKKK KLKVEPIDYY NEPLFEKKCG NIPHKITRMA FGVEEFAFGN  300
PFCWIVMRHS YVRRGFHLHI PSKFSEKYLK GVSGDITLQV SSGKQWRVRC VREGPGTKLT  360
RGWANFVMEN DLKEEDVCVF ELLDIKDIVL KVTIFRAHDF PTKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-52B3 family protein